DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4438 and Pdap1

DIOPT Version :9

Sequence 1:	NP_001188753.1	Gene:	CG4438 / 34257	FlyBaseID:	FBgn0032115	Length:	189	Species:	Drosophila melanogaster
Sequence 2:	NP_072117.1	Gene:	Pdap1 / 64527	RGDID:	620442	Length:	181	Species:	Rattus norvegicus

Alignment Length:	196	Identity:	76/196 - (38%)
Similarity:	114/196 - (58%)	Gaps:	41/196 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MPR-GKFLSYKGRTRQFTSPEEL--------RQESEDDYDQVSGSGSDSDEKVATRGGANSSSSI 56
            ||: |:...:|||.||:|||||:        ::.:|:|..:..|.|:..|.|
  Rat     1 MPKGGRKGGHKGRVRQYTSPEEIDAQLQAEKQKANEEDEQEEGGDGASGDPK------------- 52

  Fly    57 AKDRTLKKATRNQKSSSDEVDSSSEDCETESRVARKGVASLIEIDNPNRVSKKGPQKISAIMLDQ 121
                       .:|.|.|..:|..||.:.:.:  ||||..||:|:|||||::. .:|::.:.||.
  Rat    53 -----------KEKKSLDSDESEDEDDDYQQK--RKGVEGLIDIENPNRVAQT-TKKVTQLDLDG 103

  Fly   122 TKAGLSRRDQD----QSARKRYEKLHVAGKTTEARADLARLALIRKQREETAARREAEKKAANVV 182
            .|. ||||:::    |.|::||.|:|:||||.:|:|||||||:|||||||.|.::|.|:||.:..
  Rat   104 PKE-LSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKAKDDA 167

  Fly   183 T 183
            |
  Rat   168 T 168

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4438	NP_001188753.1	PP28	101..177	CDD:287254	41/79 (52%)
Pdap1	NP_072117.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..118		45/144 (31%)
		PP28	85..149	CDD:402043	33/65 (51%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	151..181		8/18 (44%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166348818
Domainoid	1	1.000	96	1.000	Domainoid score	I7137
eggNOG	1	0.900	-	-		E1_KOG3375
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	141	1.000	Inparanoid score	I4400
OMA	1	1.010	-	-		QHG60099
OrthoDB	1	1.010	-	-		D1572985at2759
OrthoFinder	1	1.000	-	-		FOG0004630
OrthoInspector	1	1.000	-	-		otm44762
orthoMCL	1	0.900	-	-		OOG6_105501
Panther	1	1.100	-	-	O	PTHR22055
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3831
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.770