DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and sad

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_416042.2 Gene:sad / 947440 ECOCYCID:G6811 Length:462 Species:Escherichia coli


Alignment Length:473 Identity:141/473 - (29%)
Similarity:219/473 - (46%) Gaps:46/473 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLA 123
            :|||.|.|.::.:..|..:||:.|:|.|...|:   .||..:...|...|..:...:......:|
E. coli    11 SINPATGEQLSVLPWAGADDIENALQLAAAGFR---DWRETNIDYRAEKLRDIGKALRARSEEMA 72

  Fly   124 SLETLDNGKPYS-----MSYNVDL---------------PTAIKNLRYFAGWADKNHGKTIPMDG 168
            .:.|.:.|||.:     ::.:.:|               ||.::|.:                  
E. coli    73 QMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQ------------------ 119

  Fly   169 DFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGF 233
               ....:.|:|....|:|||||:..:.....|.:..||..:||.|......|..|||:.|:||.
E. coli   120 ---AVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGCAQLIAQVFKDAGI 181

  Fly   234 PEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILS 298
            |:||...:.......:.:.....:..|..|||...|..|...:| ..||:..|||||..|.|:|:
E. coli   182 PQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDPFIVLN 245

  Fly   299 DTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQ 363
            |.|::.||:.|..|.:.|.||.|.|..|..:|:.|...|.||....|....:|:|.|.....||.
E. coli   246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPM 310

  Fly   364 VNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLI 428
            ...:..:::...::....|||:|:.||.:..|...|: .|||.|:|..:||..|||:||||..:.
E. coli   311 ARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYY-PPTVLANVTPEMTAFREEMFGPVAAIT 374

  Fly   429 RFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGH 493
            ..|..:..:|.||:||:||:|.:||.|..:|..:...|..|.|::|.|....|:..|||.|.||.
E. coli   375 IAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGF 439

  Fly   494 GRENGEYALSNYTEVKSV 511
            |||...:.|..:..:::|
E. coli   440 GRELSHFGLHEFCNIQTV 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 141/473 (30%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 141/473 (30%)
sadNP_416042.2 PRK13968 1..462 CDD:184426 141/473 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
21.810

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