DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and astD

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_416260.1 Gene:astD / 946260 ECOCYCID:G6942 Length:492 Species:Escherichia coli


Alignment Length:487 Identity:147/487 - (30%)
Similarity:229/487 - (47%) Gaps:58/487 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERGR 106
            ::||.:|...:.....:. ||.:.||:.:...||...::.|.:|||.||   ..|.|:..:||..
E. coli     3 LWINGDWITGQGASRVKR-NPVSGEVLWQGNDADAAQVEQACRAARAAF---PRWARLSFAERHA 63

  Fly   107 LLYRLADLMERDQVYLASLETLDNGKP-YSMSYNV-----DLPTAIKNLRYFAGWADKNHGKTIP 165
            ::.|.|.|:|.::..|.::...:.||| :..:..|     .:..:||......|    .....:|
E. coli    64 VVERFAALLESNKAELTAIIARETGKPRWEAATEVTAMINKIAISIKAYHVRTG----EQRSEMP 124

  Fly   166 MDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKE 230
               |.....||.|.||.....|:|||..:....:.|||..||||:.||:|.|..:...:.:|.::
E. coli   125 ---DGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTIIFKPSELTPWSGEAVMRLWQQ 186

  Fly   231 AGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTDVG-KLIQLASGNTNLKRVTLELGGKSPN 294
            ||.|.||:|:|.|....|.||:...|:|.:.||||.:.| :|.:..||... |.:.||:||.:|.
E. coli   187 AGLPPGVLNLVQGGRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPE-KILALEMGGNNPL 250

  Fly   295 IILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIY-DEFVERSAERAKKRTVGN------ 352
            ||....|:|.||.......|...||.|....|..::.... |.|:.|....:::.|.||      
E. coli   251 IIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQ 315

  Fly   353 PFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRP--------EG----LPGYFVQPTV 405
            ||     .|..::|:..::::    |..:|   |.|.|.||        .|    .|| .::.|.
E. coli   316 PF-----IGGLISEQAAQQVV----TAWQQ---LEAMGGRPLLAPRLLQAGTSLLTPG-IIEMTG 367

  Fly   406 FADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGT 470
            .|.|.|      ||:|||:.::.|:...||.|..|||:.:||:..:.:.:.:|.:.::...|||.
E. coli   368 VAGVPD------EEVFGPLLRVWRYDTFDEAIRMANNTRFGLSCGLVSPEREKFDQLLLEARAGI 426

  Fly   471 V-WVNTYNVLAAQAPFGGYKMSGHGRENGEYA 501
            | |.......|:.|||||...||:.|.:..||
E. coli   427 VNWNKPLTGAASTAPFGGIGASGNHRPSAWYA 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 147/487 (30%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 147/487 (30%)
astDNP_416260.1 astD 1..487 CDD:181873 147/487 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11699
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
22.000

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