DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and patD

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_415961.1 Gene:patD / 945876 ECOCYCID:G6755 Length:474 Species:Escherichia coli


Alignment Length:485 Identity:180/485 - (37%)
Similarity:276/485 - (56%) Gaps:23/485 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDA 101
            :|..|..::.|..|.      ...||.|.:|:.||..|..|.:|.||:||..||   :.|.:...
E. coli     5 LLINGELVSGEGEKQ------PVYNPATGDVLLEIAEASAEQVDAAVRAADAAF---AEWGQTTP 60

  Fly   102 SERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPM 166
            ..|...|.:|||::|.:....|.||:.:.|||...::|.::|..:...|:|||.|...:|...  
E. coli    61 KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA-- 123

  Fly   167 DGDFF----TYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQL 227
             |::.    :..|.:|:||...|.|||:|::|.||||.||||.||.:||||:|.|.||||.:|:|
E. coli   124 -GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAEL 187

  Fly   228 VKEAGFPEGVVNVVPGFG-TAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGK 291
            .|:. ||.||:|::.|.| |.|..|..|..|..|:.|||...|:.| ::...:::||..:|||||
E. coli   188 AKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHI-ISHTASSIKRTHMELGGK 250

  Fly   292 SPNIILSDTDMDYAVETAH-FGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFD 355
            :|.|:..|.|::..||... || ::|.||.|.|..|.:.:..|||..||:..........|.|.|
E. coli   251 APVIVFDDADIEAVVEGVRTFG-YYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 314

  Fly   356 LNTEQGPQVNEEQMEKILGMIKTGKKQG-AKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREE 419
            .:||.||..:...:|::...::..|..| .|::.||.:.:| .||:..||:.|....|..|.::|
E. coli   315 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG-NGYYYAPTLLAGALQDDAIVQKE 378

  Fly   420 IFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVLAAQAP 484
            :||||..:..|...::|:..||:|:||||::|:|||:.:|:.:...|:.|..||||:.:|.::.|
E. coli   379 VFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMP 443

  Fly   485 FGGYKMSGHGRENGEYALSNYTEVKSVIVK 514
            .||.|:||:|::...|.|.:||.|:.|:||
E. coli   444 HGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 177/481 (37%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 178/483 (37%)
patDNP_415961.1 ABALDH 2..473 CDD:132417 178/483 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
21.810

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