DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and ALD2

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_013893.1 Gene:ALD2 / 855206 SGDID:S000004780 Length:506 Species:Saccharomyces cerevisiae


Alignment Length:506 Identity:231/506 - (45%)
Similarity:319/506 - (63%) Gaps:28/506 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFK 91
            ||.||        .|:|||||:..|..||..||:||.|.|.|...|.|:::|:|.||:|||.|| 
Yeast    16 SLKQP--------LGLFINNEFCPSSDGKTIETVNPATGEPITSFQAANEKDVDKAVKAARAAF- 71

  Fly    92 LGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWA 156
             .:.|.:..:.:||..|..|..|:|.:|..||:|||||.||||..:...||...::..|||||.|
Yeast    72 -DNVWSKTSSEQRGIYLSNLLKLIEEEQDTLAALETLDAGKPYHSNAKGDLAQILQLTRYFAGSA 135

  Fly   157 DK-NHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLT 220
            || :.|.|||:..:.|.||...|.||..||:|||:|:.|..|||..|||.|||:::||||.|||:
Yeast   136 DKFDKGATIPLTFNKFAYTLKVPFGVVAQIVPWNYPLAMACWKLQGALAAGNTVIIKPAENTSLS 200

  Fly   221 ALYIAQLVKEAGFPEGVVNVVPGFGT-AGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRV 284
            .||.|.|:|:||||.||||:|||:|: .|.|||:|.|:||::|||||.||..:..|||.:|||.|
Yeast   201 LLYFATLIKKAGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVGGFVLEASGQSNLKDV 265

  Fly   285 TLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKR- 348
            |||.|||||.::..|.|:|.|::....|:|:|.||.|.|.||.:|:..|||:|||:..|.|||. 
Yeast   266 TLECGGKSPALVFEDADLDKAIDWIAAGIFYNSGQNCTANSRVYVQSSIYDKFVEKFKETAKKEW 330

  Fly   349 -TVG--NPFDLNTEQGPQVNEEQMEKILGMIKTGKK-------QGAKLVAGGSRPEGLPGYFVQP 403
             ..|  :|||.....||.::..|.::|...|:.||:       |.::...||::     |||:.|
Yeast   331 DVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKREEKLDMFQTSEFPIGGAK-----GYFIPP 390

  Fly   404 TVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRA 468
            |:|.||.....:.::||||||..:.:|...|:.::.||::.||||:||||||:.||:.....::|
Yeast   391 TIFTDVPQTSKLLQDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVKKAHMFARDIKA 455

  Fly   469 GTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVAQKN 519
            ||||:|:.|......||||:||||.|||.|:..:..|.:.|:|.:.::..|
Yeast   456 GTVWINSSNDEDVTVPFGGFKMSGIGRELGQSGVDTYLQTKAVHINLSLDN 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 229/497 (46%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 226/492 (46%)
ALD2NP_013893.1 ALDH_ALD2-YMR170C 14..502 CDD:143462 230/500 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53964
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100163
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X158
TreeFam 00.000 Not matched by this tool.
65.720

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