DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and ALD3

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_013892.1 Gene:ALD3 / 855205 SGDID:S000004779 Length:506 Species:Saccharomyces cerevisiae


Alignment Length:503 Identity:233/503 - (46%)
Similarity:320/503 - (63%) Gaps:28/503 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFK 91
            ||.||        .|:|||||:..|..||..||:||.|.|.|...|.|:::|:|.||:|||.|| 
Yeast    16 SLKQP--------LGLFINNEFCPSSDGKTIETVNPATGEPITSFQAANEKDVDKAVKAARAAF- 71

  Fly    92 LGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWA 156
             .:.|.:..:.:||..|..|..|:|.:|..||:|||||.|||:..:...||...|:..||:||..
Yeast    72 -DNVWSKTSSEQRGIYLSNLLKLIEEEQDTLAALETLDAGKPFHSNAKQDLAQIIELTRYYAGAV 135

  Fly   157 DK-NHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLT 220
            || |.|:|||:..:.|.||...|.||..||:|||:|:.|...|:..|||.|||:::||||.|||:
Yeast   136 DKFNMGETIPLTFNKFAYTLKVPFGVVAQIVPWNYPLAMACRKMQGALAAGNTVIIKPAENTSLS 200

  Fly   221 ALYIAQLVKEAGFPEGVVNVVPGFGT-AGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRV 284
            .||.|.|:|:||||.|||||:||:|: .|.||..|.|:||::|||||.||..:..|||.:|||.:
Yeast   201 LLYFATLIKKAGFPPGVVNVIPGYGSVVGKALGTHMDIDKISFTGSTKVGGSVLEASGQSNLKDI 265

  Fly   285 TLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKR- 348
            |||.|||||.::..|.|:|.|:|....|:|||.||.|.|.||.:|:..|||:|||:..|.|||. 
Yeast   266 TLECGGKSPALVFEDADLDKAIEWVANGIFFNSGQICTANSRVYVQSSIYDKFVEKFKETAKKEW 330

  Fly   349 -TVG--NPFDLNTEQGPQVNEEQMEKILGMIKTGKK-------QGAKLVAGGSRPEGLPGYFVQP 403
             ..|  :|||.....||.::..|.::|...|:.|||       |.::...||::     |||:.|
Yeast   331 DVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKKEEKLDMFQTSEFPIGGAK-----GYFIPP 390

  Fly   404 TVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRA 468
            |:|.||.:...:.|:||||||..:.:|...|:.::.||::.||||:||||||:.||:.....::|
Yeast   391 TIFTDVPETSKLLRDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVKKAHMFARDIKA 455

  Fly   469 GTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVA 516
            ||||:|..|...|:.||||:||||.|||:|:..:.||.::|||.|.::
Yeast   456 GTVWINQTNQEEAKVPFGGFKMSGIGRESGDTGVDNYLQIKSVHVDLS 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 231/497 (46%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 228/492 (46%)
ALD3NP_013892.1 ALDH-SF 14..502 CDD:416387 233/500 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53964
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100163
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X158
TreeFam 00.000 Not matched by this tool.
65.720

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