DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and ALDH12A1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_568955.1 Gene:ALDH12A1 / 836373 AraportID:AT5G62530 Length:556 Species:Arabidopsis thaliana


Alignment Length:463 Identity:112/463 - (24%)
Similarity:187/463 - (40%) Gaps:55/463 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FINNEW-HKSKSGKIFETINPTTAEVIAEI-QCADKEDIDIAVQAAR----NAFKLGSPWRRM-- 99
            |:..:| ..|....:.:.:|......:||: :...:..:|...|..:    |.||  ||.|.:  
plant    56 FVQGKWIGSSNHNTLLDPLNGEPFIKVAEVDESGTQPFVDSLSQCPKHGLHNPFK--SPERYLLY 118

  Fly   100 -DASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKT 163
             |.|.:...:..|..:.:    :.|.|......|.|..:......|. |.|..|.|...:...::
plant   119 GDISTKAAHMLALPKVAD----FFARLIQRVAPKSYQQAAGEVFVTR-KFLENFCGDQVRFLARS 178

  Fly   164 IPMDGDFFTYTRHE---PVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIA 225
            ..:.|:......|.   |.|....:.|:|||:.:...:|..||..||..:||...:.|:....:.
plant   179 FAIPGNHLGQQSHGYRWPYGPVTIVTPFNFPLEIPLLQLMGALYMGNKPLLKVDSKVSIVMEQMM 243

  Fly   226 QLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLK-RVTLELG 289
            :|:...|.|...|:.:...|.....:....:.....||||:.|.:.:.|     :|| |:.||..
plant   244 RLLHYCGLPAEDVDFINSDGKTMNKILLEANPRMTLFTGSSRVAEKLAL-----DLKGRIRLEDA 303

  Fly   290 GKSPNIILSDT-DMDYAVETAHFGLFFNMGQCCCAGSRTFV-EDKIYDEFVERSAERAKKR---- 348
            |....::..|. ::||.........:...||.|.|.|..|| |:......|.:..|.|::|    
plant   304 GFDWKVLGPDVQEVDYVAWQCDQDAYACSGQKCSAQSMLFVHENWSKTPLVSKLKELAERRKLED 368

  Fly   349 -TVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGS--RPEGLPGYF--VQPT-VFA 407
             |:|......||    ...|.||.:|.:      .|:||:.||.  :...:|..:  ::|| |:.
plant   369 LTIGPVLTFTTE----AMLEHMENLLQI------PGSKLLFGGKELKNHSIPSIYGALEPTAVYV 423

  Fly   408 DVQ----DDMT--IAREEIFGPVQQLIRFKK--LDEVIERANNSEYGLAAAVFTKDLDKANYIVG 464
            .::    |:.|  :..:|||||.|.:..:||  |..|:|........|.|||.:.|......::|
plant   424 PIEEILKDNKTYELVTKEIFGPFQIVTEYKKDQLPLVLEALERMHAHLTAAVVSNDPIFLQEVIG 488

  Fly   465 GLRAGTVW 472
            ....||.:
plant   489 NSVNGTTY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 112/463 (24%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 112/463 (24%)
ALDH12A1NP_568955.1 ALDH_F12_P5CDH 55..544 CDD:143444 112/463 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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