DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and ALDH2B4

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_190383.1 Gene:ALDH2B4 / 823955 AraportID:AT3G48000 Length:538 Species:Arabidopsis thaliana


Alignment Length:513 Identity:294/513 - (57%)
Similarity:367/513 - (71%) Gaps:14/513 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLRSQAKN---------FAAAVANYSSLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTA 65
            |.|||.:|         |..:.|....:..|..  .:.:|.:.||..:..|.|||.|.|::|.|.
plant    21 LFRSQGRNCYNGGILRRFGTSSAAAEEIINPSV--QVSHTQLLINGNFVDSASGKTFPTLDPRTG 83

  Fly    66 EVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDN 130
            ||||.:...|.|||:.||:|||.||..| ||.:|.|.||.|:|.|.|||:|:....||||||.||
plant    84 EVIAHVAEGDAEDINRAVKAARTAFDEG-PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDN 147

  Fly   131 GKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMM 195
            ||||..|...::|...:..||:||||||.||.|||.||::..:|.|||:||.|||||||||:||.
plant   148 GKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMF 212

  Fly   196 AWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFG-TAGAALANHCDVDK 259
            |||:|||||.|||||||.||||.|||.|..:|..|||.|.||:|:|.||| |||||||:|.||||
plant   213 AWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDK 277

  Fly   260 VAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAG 324
            :|||||||.||:|...:.|:|||.||||||||||.|:..|.|:|.|||.|||.||||.|||||||
plant   278 LAFTGSTDTGKVILGLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAG 342

  Fly   325 SRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAG 389
            |||||.:|:||||||:|..||.||.||:||....|||||::.:|.||::..||:|.:..|.|..|
plant   343 SRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECG 407

  Fly   390 GSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTK 454
            |.: .|..|||:|||||::|:|||.||::|||||||.:::|..:||||:|||.::|||||.||||
plant   408 GDQ-IGDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTK 471

  Fly   455 DLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVI 512
            :||.||.:...|:|||||||.::|..|..|||||||||:|||.|.|:|:||.::|:|:
plant   472 NLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVV 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 293/511 (57%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 286/480 (60%)
ALDH2B4NP_190383.1 PLN02466 1..538 CDD:215259 294/513 (57%)
ALDH_F2BC 55..530 CDD:143460 286/477 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 564 1.000 Domainoid score I45
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55480
Inparanoid 1 1.050 578 1.000 Inparanoid score I236
OMA 1 1.010 - - QHG53964
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 1 1.000 - - otm3087
orthoMCL 1 0.900 - - OOG6_100163
Panther 1 1.100 - - O PTHR11699
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X158
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.880

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