DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and Aldh3b3

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_082821.2 Gene:Aldh3b3 / 73458 MGIID:1920708 Length:479 Species:Mus musculus


Alignment Length:447 Identity:123/447 - (27%)
Similarity:209/447 - (46%) Gaps:40/447 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VQAARNAFKLG----SPWRRMDASERGRLLY----RLADLMERDQVYLASLETLDNGKPYSMSYN 139
            :|..:.||..|    :.:|.......||.|.    :|.|.::.| :..:..|: |..:.......
Mouse    21 LQRLKEAFNTGKTKTAKFRAEQLQSLGRFLQDNSKQLHDALDGD-LGKSGFES-DMSEIILCENE 83

  Fly   140 VDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFT-----YTRHEPVGVCGQIIPWNFPILMMAWKL 199
            |||  |:|||:   .|.     |..|:..:..|     :.|.||.|:...|.|||:|:.:|...|
Mouse    84 VDL--ALKNLQ---TWM-----KDEPVSTNLLTKLSTAFIRKEPFGLVLIIAPWNYPVNLMIIPL 138

  Fly   200 GPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTG 264
            ..|:|.||.:||||:|.:..|...:|:|:.:. ..:....|:.|.......|..| ..|.:.|||
Mouse   139 VGAIAAGNCVVLKPSEISKNTEKVLAELLPQY-LDQSCFAVMLGGPEETGQLLEH-KFDYIFFTG 201

  Fly   265 STDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFV 329
            |..|||::..|:.. :|..:|||||||:|..:..:.|.........:..:||.||.|.|......
Mouse   202 SPRVGKIVMTAAAK-HLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYILC 265

  Fly   330 EDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPE 394
            ..::.::.|. :.:.|..|..|:....:...|..:|::..:::.|::..|     ::..||...|
Mouse   266 SQEMQEQLVP-ALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLGCG-----RVAIGGQSDE 324

  Fly   395 GLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKA 459
            |  ..::.|||..|||:...:.:||||||:..|:..:.|||.||..|..|..||...::.:.:..
Mouse   325 G--ERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEAIEFMNQREKPLALYAYSNNAEVI 387

  Fly   460 NYIVGGLRAGTVWVN---TYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIV 513
            ..::....:|....|   .|..|:: .||||...||.||.:|:::...::..::.::
Mouse   388 KQVLARTSSGGFCGNDGFMYMTLSS-LPFGGVGSSGMGRYHGKFSFDTFSNQRACLL 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 123/444 (28%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 123/447 (28%)
Aldh3b3NP_082821.2 ALDH_F3AB 18..460 CDD:143450 123/447 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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