DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and aldh16a1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001039089.1 Gene:aldh16a1 / 733905 XenbaseID:XB-GENE-5726619 Length:829 Species:Xenopus tropicalis


Alignment Length:467 Identity:188/467 - (40%)
Similarity:277/467 - (59%) Gaps:19/467 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERG 105
            |.||:.:|.|.:....:.|.||.|.|.:|.....::||::.||:|||.||:   .|.::....|.
 Frog    43 GHFIDGKWLKPEGRNTYTTKNPATGEALASTVQGEEEDVETAVKAARKAFE---SWSKLPCHVRA 104

  Fly   106 RLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDF 170
            |.||.:|..:::.|..|:.:|::|||||...:.:.|:|..:::..:.||||..   :...|:|  
 Frog   105 RYLYSIARTVQKHQRLLSVIESMDNGKPIREARDCDVPLVVRHFYHHAGWAQL---RDTEMNG-- 164

  Fly   171 FTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPE 235
                 .:|:||...|:|||||::::.||:.||||.|||:|||||..|.||||.:|::..|||.|.
 Frog   165 -----WKPLGVIAAIVPWNFPLMLLTWKICPALAMGNTVVLKPATYTRLTALLLAEICAEAGLPP 224

  Fly   236 GVVNVVPGFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDT 300
            ||.|||.|.|..|..||:|.|||||||||||:||:.::.|:..|. |:::||||||||.|:...:
 Frog   225 GVFNVVTGNGAFGGKLADHPDVDKVAFTGSTEVGRTLRKATAGTG-KKLSLELGGKSPFIVFDTS 288

  Fly   301 DMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVN 365
            |:|.|||.....::||.||.|.||||..:::.|.::.:.|..:|.....:|:..|...:.|..|:
 Frog   289 DLDSAVEGIVDAIWFNQGQVCSAGSRLLMQESIAEDLIRRLKQRMSHLRLGDSLDKAIDVGALVD 353

  Fly   366 EEQMEKILGMIKTGKKQGAKLVAGGSRPEGLP--GYFVQPTVFADVQDDMTIAREEIFGPVQQLI 428
            |.|.:.|...::..:.:||.:.   ..|..:|  |.|..||:...|.......||||||||...:
 Frog   354 ETQKKTIEEFVEEAQAEGADVF---QSPGPIPKKGLFYPPTLITGVNTTSRCVREEIFGPVLVAM 415

  Fly   429 RFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGH 493
            .|:...|.|...||:.|||||:|:|::|..|..:...::|||||||.:|:..|.|.|||||.||.
 Frog   416 TFRTAKEAIALGNNTPYGLAASVWTENLPLALEVAISIKAGTVWVNGHNMFDAAAGFGGYKESGF 480

  Fly   494 GRENGEYALSNY 505
            ||:.|:..|..|
 Frog   481 GRDGGKEGLYEY 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 188/467 (40%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 188/467 (40%)
aldh16a1NP_001039089.1 ALDH_F16 21..500 CDD:143429 188/467 (40%)
ALDH-SF 572..>788 CDD:299846
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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