DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and Aldh8a1

DIOPT Version :10

Sequence 1:NP_609285.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001178017.2 Gene:Aldh8a1 / 685750 RGDID:1590218 Length:487 Species:Rattus norvegicus


Alignment Length:490 Identity:177/490 - (36%)
Similarity:278/490 - (56%) Gaps:20/490 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMD 100
            ::|....||..::....|  ..::.:|:|.||..::..:.||:|::||||||.||   ..|....
  Rat     6 ELLMLENFIGGKFLPCNS--YIDSYDPSTGEVYCKVPNSGKEEIEVAVQAAREAF---PAWSSRS 65

  Fly   101 ASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIP 165
            ..||..:|.|:||::|:....||..|:.|.||..:::..:|:|.::.|.|:||.....:......
  Rat    66 PQERSLILNRVADVLEQSLEELAQAESKDQGKTLTLARTMDIPRSVLNFRFFASSIQHHVSDCTE 130

  Fly   166 MDG-DFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVK 229
            |.. ....||...|||:.|.|.|||.|:.::.||:.||:|.|||::.||:|.||:||....:|:.
  Rat   131 MSHLGCMHYTVRTPVGIAGLISPWNLPLYLLTWKIAPAIAAGNTVIAKPSELTSVTAWMFCKLLD 195

  Fly   230 EAGFPEGVVNVVPGFGT---AGAALANHCDVDKVAFTGSTDVG-KLIQLASGNTNLKRVTLELGG 290
            :||.|.||:|||  |||   .|.||.:|.:|..::||||.... ::.||::  .:.|:::|||||
  Rat   196 KAGVPPGVINVV--FGTGPRVGEALVSHPEVPVISFTGSQPTAERITQLSA--PHCKKLSLELGG 256

  Fly   291 KSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFD 355
            |:|.||..|.:::..:.......|.|.|:.|...||.||:..||:||::|..|..:|..||.|.|
  Rat   257 KNPAIIFEDANLEECIPATVRSSFANQGEICLCTSRIFVQRSIYNEFLKRFVEATRKWKVGIPSD 321

  Fly   356 LNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAG-GSRPEGLP-----GYFVQPTVFADVQDDMT 414
            .:...|..:::..:||:...:.....:|||::.| |.....||     |||:.|||..|::|:..
  Rat   322 PSANMGALISKAHLEKVRSYVTKAHAEGAKILCGEGVDQLSLPLRNQAGYFMLPTVITDIKDESC 386

  Fly   415 IAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVL 479
            ...|||||||..::.|...:|||.|||..:|||.|.|::||:.:.:.:...|::|.||.|.:.:.
  Rat   387 CMTEEIFGPVTCVVPFDSEEEVIARANGVKYGLGATVWSKDVGRIHRVAKRLQSGLVWTNCWLIR 451

  Fly   480 AAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVK 514
            ....||||.|.||.|||..:.:...:||:|::.:|
  Rat   452 ELNLPFGGMKSSGIGREGAKDSYDFFTEIKTITIK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_609285.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 176/488 (36%)
Aldh8a1NP_001178017.2 ALDH_F8_HMSADH 27..485 CDD:143412 172/464 (37%)

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