DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and Aldh3a2

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_006246591.1 Gene:Aldh3a2 / 65183 RGDID:61866 Length:584 Species:Rattus norvegicus


Alignment Length:459 Identity:127/459 - (27%)
Similarity:209/459 - (45%) Gaps:62/459 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VQAARNAFKLGSPWRRMDASERGR-LLYRLADL-------MERDQVYLASLETLDNGKPYSMSYN 139
            ||..|..|:.|          |.| |.:||..|       .||::..||:: ..|..|....:|:
  Rat    82 VQRLRQTFRSG----------RSRPLRFRLQQLEALRRMVQEREKDILAAI-AADLSKSELNAYS 135

  Fly   140 VDLPTAIKNLRYFAG---------WADKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMM 195
            .::.|.:..:.:..|         .|.||   .:.|..:  .|.:.||:||...|..||:|.::.
  Rat   136 HEVITILGEIDFMLGNLPELASARPAKKN---LLTMMDE--AYVQPEPLGVVLIIGAWNYPFVLT 195

  Fly   196 AWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKV 260
            ...|..|:|.||..::||:|.:..||..:|:|:.:. ..:.:..:|.| |............|.:
  Rat   196 LQPLVGAIAAGNAAIVKPSELSENTAKILAELLPQY-LDQDLYMIVNG-GVEETTELLRQRFDHI 258

  Fly   261 AFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGS 325
            .:||:|.|||::..|:.. :|..||||||||||..|..|.|:|.|.....:|.:.|.||.|.|..
  Rat   259 LYTGNTAVGKIVMEAAAK-HLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKYMNCGQTCIAPD 322

  Fly   326 RTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQ----VNEEQMEKILGMIKTGKKQGAKL 386
            ....|..:.|:.|::.     |.||.:.:..|.:..|.    :|....::|..::     :|.|:
  Rat   323 YILCEASLQDQIVQKI-----KDTVKDFYGENVKASPDYERIINLRHFKRIKSLL-----EGQKI 377

  Fly   387 VAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAV 451
            ..||...|..  .::.||:..||..:..:.:||||||:..::..|.::|.|...|:.|..||..:
  Rat   378 AFGGETDEAT--RYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPLALYI 440

  Fly   452 FTKDLDKANYIVGGLRAGTVWVN------TYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKS 510
            |:.:......::....:|.|..|      |.|.|    ||||...||.|..:|:|:...::..:.
  Rat   441 FSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSL----PFGGVGASGMGAYHGKYSFDTFSHQRP 501

  Fly   511 VIVK 514
            .::|
  Rat   502 CLLK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 126/455 (28%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 126/457 (28%)
Aldh3a2XP_006246591.1 ALDH_F3AB 82..521 CDD:143450 127/459 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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