DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and Aldh9a1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_071609.2 Gene:Aldh9a1 / 64040 RGDID:68409 Length:497 Species:Rattus norvegicus


Alignment Length:496 Identity:188/496 - (37%)
Similarity:295/496 - (59%) Gaps:21/496 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 TGVFINNEWHKSKSGKIFETIN---------PTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSP 95
            ||.|:.::....:.|...|.::         |.|...||..:|:.::::::||:.|:.|||:   
  Rat     3 TGTFVVSQPLNYRGGARVEPVDASGTEKAFEPATGREIATFKCSGEKEVNLAVENAKAAFKI--- 64

  Fly    96 WRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNH 160
            |.:....||.::|...|.:::..:..:|.:||::|||.. ....:|:.|:.:.|.|:||.|....
  Rat    65 WSKKSGLERCQVLLEAARIIKERRDEIAIMETINNGKSI-FEARLDVDTSWQCLEYYAGLAASMA 128

  Fly   161 GKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIA 225
            |:.|.:.|..|.|||.||:|||..|..||:|..:..||..||||.||.::.||:..|.::||.:|
  Rat   129 GEHIQLPGGSFGYTRREPLGVCLGIGAWNYPFQIACWKSAPALACGNAMIFKPSPFTPVSALLLA 193

  Fly   226 QLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTDVG-KLIQLASGNTNLKRVTLELG 289
            ::..:||.|.|:.|||.|....|..|..|.||.||:||||...| |::::|:  ..:|.:|||||
  Rat   194 EIYTKAGAPNGLFNVVQGGAATGQFLCQHRDVAKVSFTGSVPTGMKIMEMAA--KGIKPITLELG 256

  Fly   290 GKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPF 354
            ||||.||.||.:|..||:.|....|...||.||.|:|.||:.:|.|.|.:....:.::..:|:|.
  Rat   257 GKSPLIIFSDCNMKNAVKGALLANFLTQGQVCCNGTRVFVQKEIADAFTKEVVRQTQRIKIGDPL 321

  Fly   355 DLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGG-----SRPEGLPGYFVQPTVFADVQDDMT 414
            ..:|..||.:|...:|::||.:::.|:|||.::.||     ..|:...||::.|.:..:..||||
  Rat   322 LEDTRMGPLINAPHLERVLGFVRSAKEQGATVLCGGEPYAPEDPKLKHGYYMTPCILTNCTDDMT 386

  Fly   415 IAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVL 479
            ..:|||||||..::.|:...||:||||::.:||||.|||:|:.:|:.:...|:|||.::|.|||.
  Rat   387 CVKEEIFGPVMSILTFETEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVS 451

  Fly   480 AAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVAQKNS 520
            ..:.||||||.||.|||||...:..|:::|:|.|::....|
  Rat   452 PVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDVES 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 185/486 (38%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 186/488 (38%)
Aldh9a1NP_071609.2 ALDH_F9_TMBADH 31..488 CDD:143409 182/462 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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