DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and Aldh1a3

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_444310.3 Gene:Aldh1a3 / 56847 MGIID:1861722 Length:512 Species:Mus musculus


Alignment Length:494 Identity:304/494 - (61%)
Similarity:394/494 - (79%) Gaps:2/494 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFK 91
            :||:|....::.:|.:||||:||:||||:.|.|.||:|.|.|.|::..||.|:|.||:||:.||:
Mouse    19 ALPRPIRNLEVKFTKIFINNDWHESKSGRKFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQ 83

  Fly    92 LGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWA 156
            .||||||:||..||:||::||||:|||:..||:|||:|.|||:..::.|||...||..|||||||
Mouse    84 RGSPWRRLDALSRGQLLHQLADLVERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWA 148

  Fly   157 DKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTA 221
            ||..|:|||.|.:...:|||||:||||.|.|||||:||:||||.|||..|||:||||||||.|||
Mouse   149 DKIQGRTIPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTA 213

  Fly   222 LYIAQLVKEAGFPEGVVNVVPGFG-TAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVT 285
            ||:|.|:||.|||.||||:||||| |.|||:::|..::|:||||||:||||::.|:..:||||||
Mouse   214 LYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVT 278

  Fly   286 LELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTV 350
            ||||||:|.|:.:|.|:|.|||.||.|:|||.||||.|.||.|||:::|.|||.||.|.||||.|
Mouse   279 LELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPV 343

  Fly   351 GNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTI 415
            |:|||..||||||::::|.:|||.:|::|||:||||..|||..|. .|.|::||||:||.|:|.|
Mouse   344 GDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMED-RGLFIKPTVFSDVTDNMRI 407

  Fly   416 AREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVLA 480
            |:||||||||.:::||.|:|||:|||:::|||.||||||:||||..:...|.:||||:|.||...
Mouse   408 AKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLAAALESGTVWINCYNAFY 472

  Fly   481 AQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVAQKN 519
            |||||||:||||:|||.|||||:.|||||:|.:|:.:||
Mouse   473 AQAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKLEEKN 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 300/485 (62%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 298/480 (62%)
Aldh1a3NP_444310.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 1/2 (50%)
ALDH_F1AB_F2_RALDH1 26..506 CDD:143459 298/480 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53964
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100163
Panther 1 1.100 - - O PTHR11699
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X158
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.830

Return to query results.
Submit another query.