DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and aldh6a1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001002374.1 Gene:aldh6a1 / 436647 ZFINID:ZDB-GENE-030131-9192 Length:525 Species:Danio rerio


Alignment Length:494 Identity:143/494 - (28%)
Similarity:244/494 - (49%) Gaps:24/494 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SSLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAF 90
            ||:|.         |.:||:.::.:|||.:..:..||.|:|||..:..|.:|::..||.:...||
Zfish    25 SSVPT---------TKLFIDGKFVESKSSQWLDIHNPATSEVIGRVPKATQEEMLAAVDSCSRAF 80

  Fly    91 KLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGW 155
            :   .|.......|.::.:|...|::.:...||.|.||:.||..:.:.. |:...::.:.:....
Zfish    81 Q---TWSETSILARQQIFFRYQQLIKDNIKELAKLITLEQGKTLADAEG-DVFRGLQVVEHTCSI 141

  Fly   156 ADKNHGKTIP-MDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSL 219
            .....|:|:| :..|..|||...|:|||..|.|:|||.::..|.....:..|||.:|||:|:...
Zfish   142 TSLMLGETLPSLTKDMDTYTYRLPIGVCAGIAPFNFPAMIPLWMFPMGMVCGNTYLLKPSERVPG 206

  Fly   220 TALYIAQLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRV 284
            ..:.:|:|:::||.|:|.:|::.|...|...:.:|..:..::|.||...|:.| ...|:.|.|||
Zfish   207 CTMMLAKLLQDAGAPDGTLNIIHGQHDAVNFICDHPAIRAISFVGSNQAGEYI-YERGSKNGKRV 270

  Fly   285 TLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRT 349
            ...:|.|:..:|:.|.:.:..:.......|...||.|.|.|...:..:..| ::....||||...
Zfish   271 QSNMGAKNHGVIMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEARD-WLPELVERAKSLR 334

  Fly   350 VGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGY----FVQPTVFADVQ 410
            |........:.||.::.:..|::..:|::|..:|||::..| |...:.||    ||.||:.::|.
Zfish   335 VNAGDQPGADVGPLISPQAKERVNSLIQSGVDEGAKVLLDG-RNVKVKGYENGNFVGPTIISNVT 398

  Fly   411 DDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNT 475
            .:||..:|||||||..::....|||.|:..|.:.||...|:||.:...|......:..|.:.||.
Zfish   399 PEMTCYKEEIFGPVLVVLEADSLDEAIKIVNKNPYGNGTAIFTTNGAAARKYSHEVDVGQIGVNV 463

  Fly   476 -YNVLAAQAPFGGYKMSGHGREN--GEYALSNYTEVKSV 511
             ..|......|.|.:.|..|..|  |:..:..||::|::
Zfish   464 PIPVPLPMFSFTGSRGSFRGDTNFYGKQGIQFYTQIKTI 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 143/494 (29%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 140/486 (29%)
aldh6a1NP_001002374.1 ALDH_F6_MMSDH 30..506 CDD:143404 140/480 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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