DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and elp3

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001001215.1 Gene:elp3 / 407885 XenbaseID:XB-GENE-957348 Length:549 Species:Xenopus tropicalis


Alignment Length:316 Identity:61/316 - (19%)
Similarity:104/316 - (32%) Gaps:90/316 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 TGNTIVLKPA----------------EQTSLTAL------YI-----AQLVKEAGFPEGVVNVVP 242
            |||..|..|.                |.||:.|:      |:     .:.:|:.|.....|..:.
 Frog   107 TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIV 171

  Fly   243 GFGTAGAALANHCDV------DKVAFTGSTDVGKLIQLAS-GNTNLKRVTLELGGKSPNIILSDT 300
            ..||..|...::.|.      |.::...|..|.:.::.:. .||....:|:|            |
 Frog   172 MGGTFMALSEDYRDFFIRNLHDALSGHTSNSVSEAVRYSERSNTKCVGITIE------------T 224

  Fly   301 DMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKK-RTVGNPFDLNTEQGPQV 364
            ..||.:: .|.....:.|   |......|: .:|:: |.|...|... :.|...|.:..:.|.:|
 Frog   225 RPDYCLK-RHLSDMLSYG---CTRLEIGVQ-SVYED-VARDTNRGHTVKAVCESFHMAKDAGFKV 283

  Fly   365 NEEQMEKILGM-IKTGKKQGAKLVAGGS-RPEGLPGY--------------------FVQPTVFA 407
            ....|..:..: ::...:|..:.....: ||:|:..|                    ...|:...
 Frog   284 VSHMMPDLPNVGLERDTEQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRYRSYSPSTLV 348

  Fly   408 DVQDDMTIAREEIFGP-------VQQLIRFKKLDEVIERANNSEYGLAAAVFTKDL 456
            |:     :||.....|       ||:.|....:...:|..|..|..||.   .|||
 Frog   349 DL-----VARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALAR---MKDL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 61/316 (19%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 61/316 (19%)
elp3NP_001001215.1 ELP3 39..548 CDD:273503 61/316 (19%)
Acetyl-CoA binding. /evidence=ECO:0000250|UniProtKB:A0A1C7D1B7 476..479
Acetyl-CoA binding. /evidence=ECO:0000250|UniProtKB:A0A1C7D1B7 499..501
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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