DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and CG17896

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_569845.2 Gene:CG17896 / 30995 FlyBaseID:FBgn0023537 Length:520 Species:Drosophila melanogaster


Alignment Length:510 Identity:150/510 - (29%)
Similarity:252/510 - (49%) Gaps:25/510 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLRSQAKNFAAAVANYSSLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCA 74
            |:.::|::.|.  .:|||     ..|.   |.:||:.::.:||:.:..:..:|.|.:|:..:..|
  Fly     6 LIGAEARHLAK--RSYSS-----AAPT---TKLFIDGKFVESKTNEWIDVHDPATNQVVTRVPKA 60

  Fly    75 DKEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYN 139
            .:.::..|:::.:.||:   .|.......|.:::::|..|::.:...||...|.:.||..:.:..
  Fly    61 TQAEMQAALESNKKAFR---SWSNQSILTRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEG 122

  Fly   140 VDLPTAIKNLRYFAGWADKNHGKTIP-MDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPAL 203
             |:...::.:.:.........|:|:. :..|..||:...|:||...:.|:|||.::..|....|:
  Fly   123 -DVLRGLQVVEHCCSIPSLQMGETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAI 186

  Fly   204 ATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTDV 268
            .||||::|||:|:.....:.:.:|:.|||.|.|||||:.|...|...:.:..::..|:|.||...
  Fly   187 TTGNTMLLKPSERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPEIKAVSFVGSDQA 251

  Fly   269 GKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCA-GSRTFVEDK 332
            ||.|...:|. |.|||...:|.|:..|||.|.:.:..:.......|...||.|.| .:..||.|.
  Fly   252 GKYIYERAGK-NGKRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDA 315

  Fly   333 IYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSR---PE 394
              ..::....|||:|..|.......|:.||.::....::|..:|::|.|:||||:..|.:   |.
  Fly   316 --QAWIPDLVERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPG 378

  Fly   395 GLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKA 459
            ...||||.||:.:||...|....|||||||..:::...||:.|...|.:.||...||||.:...|
  Fly   379 YEDGYFVGPTILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAA 443

  Fly   460 NYIVGGLRAGTVWVNT-YNVLAAQAPFGGYKMSGHGREN--GEYALSNYTEVKSV 511
            ...|..:.||.|.||. ..|......|.|.:.|..|..:  |:..:..||:.|:|
  Fly   444 RKFVNEIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTV 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 150/510 (29%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 144/486 (30%)
CG17896NP_569845.2 ALDH_F6_MMSDH 26..502 CDD:143404 143/480 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454107
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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