DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and Aldh3b1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001006999.1 Gene:Aldh3b1 / 309147 RGDID:1359546 Length:468 Species:Rattus norvegicus


Alignment Length:444 Identity:124/444 - (27%)
Similarity:202/444 - (45%) Gaps:32/444 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMS---------Y 138
            :|..|.||..|   |...|..|...|..|:..:..::..|......|..|....|         .
  Rat     8 LQQLREAFNAG---RTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAISQA 69

  Fly   139 NVDLPTAIKNLRYFAGW-ADKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPA 202
            .|||  |::|||   .| .|:...|.:....| ..:.|.||.|:...|:|||:|:.:....|..|
  Rat    70 EVDL--ALRNLR---SWMKDEKVSKNLATQLD-SAFIRKEPFGLVLIIVPWNYPLNLTLVPLVGA 128

  Fly   203 LATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTD 267
            :|.||.:||||:|.:..|...:|:::... ..:....||.|.......|..| ..|.:.|||:|.
  Rat   129 IAAGNCVVLKPSEISKATEKILAEVLPRY-LDQSCFAVVLGGPQETGQLLEH-RFDYIFFTGNTY 191

  Fly   268 VGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDK 332
            |||:: :|:...:|..:|||||||:|..:..:.|.........:..:||.||.|.|........:
  Rat   192 VGKIV-MAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYVLCSQE 255

  Fly   333 IYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLP 397
            :.:..|. :.:.|..|..|:....:...|..:|::..|::.|::..|     ::..||...||  
  Rat   256 MQERLVP-ALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLGCG-----RVAIGGQSDEG-- 312

  Fly   398 GYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYI 462
            ..::.|||..|||:...:.:||||||:..|:....|||.||..|..|..||...|:|.......:
  Rat   313 ERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEAIEFINRREKPLALYAFSKRSQVIKQV 377

  Fly   463 VGGLRAGTVWVNT--YNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVK 514
            :....:|....|.  .::..:..||||...||.||.:|:::...::..::.:::
  Rat   378 LARTSSGGFCGNDGFMHMTLSSLPFGGVGTSGMGRYHGKFSFDTFSNQRACLLR 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 124/440 (28%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 124/442 (28%)
Aldh3b1NP_001006999.1 ALDH_F3AB 5..447 CDD:143450 124/444 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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