DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and Aldh1a7

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_017446019.2 Gene:Aldh1a7 / 29651 RGDID:620252 Length:538 Species:Rattus norvegicus


Alignment Length:507 Identity:292/507 - (57%)
Similarity:373/507 - (73%) Gaps:19/507 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKL 92
            :|.|.....|.:|.:|||||||.|.|.:.|..|||.|.|||..::..||.|:|.||:|||.||::
  Rat    37 VPAPLDNLKIQHTKIFINNEWHDSVSHEKFPVINPATEEVICHVEEGDKADVDKAVKAARQAFQI 101

  Fly    93 GSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWAD 157
            |||||.||||||||||.:||||||||.:.||::|:::.||.::.:|.:|...:||.|:|||||||
  Rat   102 GSPWRTMDASERGRLLNKLADLMERDHLLLATMESMNAGKIFTHAYMLDTEVSIKALKYFAGWAD 166

  Fly   158 KNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTAL 222
            |.||:|||.|||.|||||.|.:||||||||||.|::...||:||||:.|||:::||||||.||||
  Rat   167 KIHGQTIPSDGDVFTYTRREHIGVCGQIIPWNGPLVSFIWKIGPALSCGNTVIVKPAEQTPLTAL 231

  Fly   223 YIAQLVKEAGFPEGVVNVVPGFG-TAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTL 286
            ::|.|:||||||.||||||||:| |||||:::|.|:|||:|||||:||.....::..:.|....|
  Rat   232 HMASLIKEAGFPPGVVNVVPGYGPTAGAAISSHMDIDKVSFTGSTEVGPFFGTSNDFSFLFITIL 296

  Fly   287 ELGGKSPNIILS-------------DTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFV 338
            .|    .|||:.             ...:|.|||.||.|:||:.||.|.|.||.|||:.||||||
  Rat   297 HL----RNIIVCVFFRKYFFSHVNVSFAVDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFV 357

  Fly   339 ERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQP 403
            .||.|||||..:|||.|....||||:::||..|||.:|::|||:||||..||.| .|..|:||||
  Rat   358 RRSVERAKKYVLGNPLDSGMSQGPQIDKEQHVKILDLIESGKKEGAKLECGGGR-WGNKGFFVQP 421

  Fly   404 TVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRA 468
            |||::|.|:|.||:|||||||||:::||.:||||:||||:.|||||.|||||||:|..:...|:|
  Rat   422 TVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDEVIKRANNTPYGLAAGVFTKDLDRAITVSSALQA 486

  Fly   469 GTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVAQKNS 520
            ||||||.|..|:.|.||||:||||:|||.||..:..|||:|:|.:|::||||
  Rat   487 GTVWVNCYLALSVQCPFGGFKMSGNGREMGEQGVYEYTELKTVAMKISQKNS 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 286/497 (58%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 285/493 (58%)
Aldh1a7XP_017446019.2 ALDH_F1AB_F2_RALDH1 43..532 CDD:143459 285/493 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53964
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100163
Panther 1 1.100 - - O PTHR11699
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X158
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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