DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and SPAC1002.12c

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_593499.2 Gene:SPAC1002.12c / 2543267 PomBaseID:SPAC1002.12c Length:547 Species:Schizosaccharomyces pombe


Alignment Length:527 Identity:180/527 - (34%)
Similarity:272/527 - (51%) Gaps:39/527 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALLRSQAKN--FAAAVANYSSLPQPQTTPDILYTGVF----------INNEWHKSKSGKIFETIN 61
            :||:...:|  |||.::..|.|     :.:|....:|          |..:|..:.|||.|:..|
pombe    35 SLLKRNCRNRSFAANMSTSSKL-----STNIKDLSLFDLEEFPARSYIGGKWVTAASGKTFDVEN 94

  Fly    62 PTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLE 126
            |...|.:|.:.....|:...|::.|..||   ..:|..|..||..:|.|..||:..:...||::.
pombe    95 PGLNETLAPVTDMSVEETRKAIKVAHEAF---LSYRNSDIKERYAILRRWYDLIMENADDLATMM 156

  Fly   127 TLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFF--------TYTRHEPVGVCG 183
            ||:|||.        |..|...:.|.|.:.|...|:.:.:.||..        ..|..:||||.|
pombe   157 TLENGKA--------LGDAKGEVVYAAKFIDWFAGEALRISGDSSMSSNPQNRIITIKQPVGVVG 213

  Fly   184 QIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGTA- 247
            .|.|||||..|:..|:|.|||.|.|:|::||.:|..|||.:|:|.:.||.|.||:|:|.....: 
pombe   214 IITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALAKLAERAGVPAGVLNMVTANSPSE 278

  Fly   248 -GAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHF 311
             |..|..:..:.||:|||||:|||::...|.:| ||:::|||||.:|.|:..|.|::.|.:....
pombe   279 HGIELTTNPLIRKVSFTGSTNVGKILAKQSSST-LKKLSLELGGNAPFIVFEDADLEKAADALMA 342

  Fly   312 GLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMI 376
            ..|...||.|...:|.:|...:||.||:...||..|..:|...|.....||.::|:.:.|:...:
pombe   343 CKFRGSGQTCVCANRIYVHSSVYDAFVDLVTERVSKFKLGYGLDAGVTHGPLISEKAISKVKQHV 407

  Fly   377 KTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERAN 441
            :...::|..:|.||.....|...:.:|||..:.:..|.|:.||.||||..|.:|...|||:..||
pombe   408 EDAVQKGGVVVTGGKVASNLGPMYFEPTVIINAKQGMLISEEETFGPVGALFKFDTEDEVVAWAN 472

  Fly   442 NSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYT 506
            :|..|||..:|:||:.:...:...|:.|.|..||..|....:||||.|.||.|||..:|.:|.|.
pombe   473 DSPVGLAGYLFSKDISRVFRVGEALQVGMVGCNTGLVSDVLSPFGGVKESGFGREGSKYGISEYL 537

  Fly   507 EVKSVIV 513
            ::||:.:
pombe   538 DIKSLTI 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 180/524 (34%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 172/500 (34%)
SPAC1002.12cNP_593499.2 PLN02466 21..542 CDD:215259 179/523 (34%)
ALDH_F5_SSADH_GabD 92..544 CDD:143421 164/463 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.