DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and atd1

DIOPT Version :10

Sequence 1:NP_609285.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_594582.1 Gene:atd1 / 2542976 PomBaseID:SPAC9E9.09C Length:503 Species:Schizosaccharomyces pombe


Alignment Length:476 Identity:249/476 - (52%)
Similarity:341/476 - (71%) Gaps:3/476 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERG 105
            |:||||:...|..|...:..:|:|.::|.|:..||:||:||||:.||.||:..:|||:..:::||
pombe    24 GLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFSSAQRG 88

  Fly   106 RLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDF 170
            |.|.||||.:|::..||||:|||||||..:::.. |:..|....||:.|||||::|:||..|...
pombe    89 RCLSRLADCIEQNLEYLASIETLDNGKSITLARG-DVQAAADCFRYYGGWADKDYGQTIETDIKR 152

  Fly   171 FTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPE 235
            |.||||||:||||||||||||.||.|||:.||:|.||||:||.||.|.|:||.:.:.|.|.|||.
pombe   153 FAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGFPP 217

  Fly   236 GVVNVVPGFG-TAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSD 299
            ||:||:.|.| ..|.|:::|.|:|||||||||.||:::..|:.::|||:||||||||||||:.:|
pombe   218 GVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRMVMRAAASSNLKKVTLELGGKSPNIVFND 282

  Fly   300 TDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQV 364
            .|:|.|....::|:|:|.||.||||||.:|::.:||||::|...:||...||:||..:|.||.||
pombe   283 ADLDSAAVWTNYGIFYNSGQVCCAGSRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQV 347

  Fly   365 NEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIR 429
            :::|.|:|:..|::|...||||..||.| .|..||||:||:.::|.:||.:.:|||||||..:|:
pombe   348 SKQQYERIVSYIESGIAHGAKLEIGGKR-HGNLGYFVEPTILSNVTEDMAVGKEEIFGPVLAVIK 411

  Fly   430 FKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHG 494
            ||.::|.|.|.|||.|||||.|.|.::..|..:...|.|||||||.||:|..|.||||||.||.|
pombe   412 FKTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKESGIG 476

  Fly   495 RENGEYALSNYTEVKSVIVKV 515
            ||.|.|.|:|||:.|:|.:.:
pombe   477 RELGSYGLTNYTQTKAVHINL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_609285.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 249/473 (53%)
atd1NP_594582.1 ALDH_AldA_AN0554 17..497 CDD:143461 249/474 (53%)

Return to query results.
Submit another query.