DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and SPBC24C6.04

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001342759.1 Gene:SPBC24C6.04 / 2540387 PomBaseID:SPBC24C6.04 Length:548 Species:Schizosaccharomyces pombe


Alignment Length:525 Identity:128/525 - (24%)
Similarity:221/525 - (42%) Gaps:78/525 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAE---------VIAEIQCADKEDIDIAVQAA 86
            |.|.|.|:              .||..||  .|..|         |:|....|..:.::.|::||
pombe    42 PVTIPVII--------------DGKEVET--NTIGEQRCPFEHKKVVARYHRAGAKHVEDAIEAA 90

  Fly    87 RNAFKLGSPWRRMDASERGRLLYRLADLMERDQVY-LASLETLDNGKPYSMSYNVDLPTAIKN-L 149
            ....|:   |..:..::|..:..:.|.|:.....| |.:...:..||....: .:|....|.: |
pombe    91 LRGKKV---WESLPFADRSAIFLKAAHLISTKYRYKLMAATMIGQGKNIWQA-EIDAGMEIIDFL 151

  Fly   150 RYFAGWADK--------------NHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLG 200
            |:...:|.:              |..:..|::|  |.|.          |.|:||..:  |..|.
pombe   152 RFNTKYASELYASQPPENTPGVWNRMEYRPLEG--FVYA----------ITPFNFTAI--AGNLA 202

  Fly   201 PA-LATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGTAGAALA-NHCDVDKVAFT 263
            .| |..||.:::||::...|::..:.|:.:|||.|.|.:..:||.....:.:. ||.:...:.||
pombe   203 AAPLLMGNVVLMKPSDHAVLSSYIVYQIFREAGLPAGALQFIPGDAVEVSKVCFNHPEFAGLHFT 267

  Fly   264 GSTDVGKLI------QLASGN-TNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCC 321
            |||.|.:.:      .:|:|. ....::..|.|||:.:::.|..::..||..|....|...||.|
pombe   268 GSTAVFRSLWGTIGENVANGKYRTYPKIVGETGGKNFHLVHSSAEIKSAVVNAVRAAFEYQGQKC 332

  Fly   322 CAGSRTFVEDKIYDE-FVERSAERAKKRTVGNPF-DLNTEQGPQVNEEQMEKILGMIKTGKKQGA 384
            .|.||.:|....::. |.:...::.|...||.|. |.....||.:::....|:..::::......
pombe   333 SALSRLYVSKYAWENGFRDELTKQVKSLKVGAPLTDFANFVGPVIHQASFNKLKKVLESAASDSE 397

  Fly   385 KLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFK--KLDEVIERAN-NSEYG 446
            ..|..|.:.:...|:||:|||.........|...|:||||..:..::  .||.|.:..: .:.||
pombe   398 IEVLAGGKADDSEGFFVEPTVLLSKNPKHDIFVNELFGPVLSVYVYEDDNLDAVCDLIDTTTPYG 462

  Fly   447 LAAAVFTKDLDKANYIVGGLR--AGTVWVN--TYNVLAAQAPFGGYKMSGHGRENGE-YALSNYT 506
            |..::|.:|......:...||  ||..::|  ....:..:.||||.:.||...:.|. ..||.:.
pombe   463 LTGSIFAQDRVVVRKLTDRLRNAAGNFYINDKCTGAVVGEQPFGGARASGTNDKAGSGMILSRFV 527

  Fly   507 EVKSV 511
            ..:|:
pombe   528 SPRSI 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 128/525 (24%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 126/522 (24%)
SPBC24C6.04NP_001342759.1 ALDH_F4-17_P5CDH 12..537 CDD:143441 128/525 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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