DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and Aldh3a1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_114178.1 Gene:Aldh3a1 / 25375 RGDID:2088 Length:453 Species:Rattus norvegicus


Alignment Length:466 Identity:136/466 - (29%)
Similarity:208/466 - (44%) Gaps:68/466 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 IDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETL------DNGKPYSMS 137
            |...|:.||.||..|         :...|.:|:..|....::...:|:::      |.||....|
  Rat     4 ISDTVKRAREAFNSG---------KTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTS 59

  Fly   138 YN-------VDLPTAIKNLRYFAGWA-DKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILM 194
            |.       .:|.|.||.|   ..|| |:...||.....|.. |...||:||...|..||:|..:
  Rat    60 YYEEVAHVLEELDTTIKEL---PDWAEDEPVAKTRQTQQDDL-YIHSEPLGVVLVIGAWNYPFNL 120

  Fly   195 MAWKLGPALATGNTIVLKPAE----QTSLTALYIAQ-------LVKEAGFPEGVVNVVPGFGTAG 248
            ....:..|:|.||.::|||:|    ...|.|..|.|       ||.:.|.||....:...|    
  Rat   121 TIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERF---- 181

  Fly   249 AALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGL 313
                     |.:.:||||.|||:: :|:...:|..||||||||||..:..|.|:|.|.....:|.
  Rat   182 ---------DHIMYTGSTAVGKIV-MAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGK 236

  Fly   314 FFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKT 378
            |.|.||.|.|......:..|.::.||: .:::.|...|.....:.:.|..:|:...:::.|:|  
  Rat   237 FMNSGQTCVAPDYILCDPSIQNQIVEK-LKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLI-- 298

  Fly   379 GKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNS 443
               ...|:..||:..:.  ..::.||:..||.....:.:|||||||..::..:.|:|.|:..|..
  Rat   299 ---DNQKVAHGGTWDQS--SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQR 358

  Fly   444 EYGLAAAVFT---KDLDK--ANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALS 503
            |..||..||:   |.:.|  |....||:.|..|.|   ::.....||||...||.|..:|:.:..
  Rat   359 EKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIV---HITVPTLPFGGVGNSGMGAYHGKKSFE 420

  Fly   504 NYTEVKSVIVK 514
            .::..:|.:||
  Rat   421 TFSHRRSCLVK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 134/462 (29%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 134/464 (29%)
Aldh3a1NP_114178.1 ALDH_F3AB 5..447 CDD:143450 135/465 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.