DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and Aldh3a1

DIOPT Version :10

Sequence 1:NP_609285.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_114178.1 Gene:Aldh3a1 / 25375 RGDID:2088 Length:453 Species:Rattus norvegicus


Alignment Length:466 Identity:136/466 - (29%)
Similarity:208/466 - (44%) Gaps:68/466 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 IDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETL------DNGKPYSMS 137
            |...|:.||.||..|         :...|.:|:..|....::...:|:::      |.||....|
  Rat     4 ISDTVKRAREAFNSG---------KTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTS 59

  Fly   138 YN-------VDLPTAIKNLRYFAGWA-DKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILM 194
            |.       .:|.|.||.|   ..|| |:...||.....|.. |...||:||...|..||:|..:
  Rat    60 YYEEVAHVLEELDTTIKEL---PDWAEDEPVAKTRQTQQDDL-YIHSEPLGVVLVIGAWNYPFNL 120

  Fly   195 MAWKLGPALATGNTIVLKPAE----QTSLTALYIAQ-------LVKEAGFPEGVVNVVPGFGTAG 248
            ....:..|:|.||.::|||:|    ...|.|..|.|       ||.:.|.||....:...|    
  Rat   121 TIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERF---- 181

  Fly   249 AALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGL 313
                     |.:.:||||.|||:: :|:...:|..||||||||||..:..|.|:|.|.....:|.
  Rat   182 ---------DHIMYTGSTAVGKIV-MAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGK 236

  Fly   314 FFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKT 378
            |.|.||.|.|......:..|.::.||: .:::.|...|.....:.:.|..:|:...:::.|:|  
  Rat   237 FMNSGQTCVAPDYILCDPSIQNQIVEK-LKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLI-- 298

  Fly   379 GKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNS 443
               ...|:..||:..:.  ..::.||:..||.....:.:|||||||..::..:.|:|.|:..|..
  Rat   299 ---DNQKVAHGGTWDQS--SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQR 358

  Fly   444 EYGLAAAVFT---KDLDK--ANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALS 503
            |..||..||:   |.:.|  |....||:.|..|.|   ::.....||||...||.|..:|:.:..
  Rat   359 EKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIV---HITVPTLPFGGVGNSGMGAYHGKKSFE 420

  Fly   504 NYTEVKSVIVK 514
            .::..:|.:||
  Rat   421 TFSHRRSCLVK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_609285.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 134/464 (29%)
Aldh3a1NP_114178.1 ALDH_F3AB 5..447 CDD:143450 135/465 (29%)

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