DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and Aldh8a1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_848828.1 Gene:Aldh8a1 / 237320 MGIID:2653900 Length:487 Species:Mus musculus


Alignment Length:491 Identity:176/491 - (35%)
Similarity:280/491 - (57%) Gaps:22/491 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMD 100
            ::|....||..::....|  ..::.:|:|.||..::..:.||:|:.||:|||.||   ..|....
Mouse     6 ELLMLENFIGGKFLPCNS--YIDSYDPSTGEVYCKVPNSGKEEIEAAVEAAREAF---PAWSSRS 65

  Fly   101 ASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIP 165
            ..||..:|.||||::|:....||..|:.|.||..:::..:|:|.::.|.|:||. ::.:|.....
Mouse    66 PQERSLVLNRLADVLEQSLEELAQAESKDQGKTLTLARTMDIPRSVLNFRFFAS-SNLHHVSECT 129

  Fly   166 MDGDF--FTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLV 228
            .....  ..||...|||:.|.|.|||.|:.::.||:.||:|.|||::.||:|.||:||....:|:
Mouse   130 QMSHLGCMHYTVRTPVGIAGLISPWNLPLYLLTWKIAPAIAAGNTVIAKPSEMTSVTAWMFCKLL 194

  Fly   229 KEAGFPEGVVNVVPGFGT---AGAALANHCDVDKVAFTGSTDVG-KLIQLASGNTNLKRVTLELG 289
            .:||.|.||:|:|  |||   .|.||.:|.:|..::||||.... ::.||::  .:.|:::||||
Mouse   195 DKAGVPPGVINIV--FGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSA--PHCKKLSLELG 255

  Fly   290 GKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPF 354
            ||:|.||..|.:::..:.......|.|.|:.|...||.||:..||.||::|..|..:|..||.|.
Mouse   256 GKNPAIIFEDANLEECIPATVRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEATRKWKVGVPS 320

  Fly   355 DLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAG-GSRPEGLP-----GYFVQPTVFADVQDDM 413
            |.:...|..:::..:||:...:...:.:||:::.| |.....||     |||:.|||..|::|:.
Mouse   321 DPSANMGALISKAHLEKVRSYVLKAQTEGARILCGEGVDQLSLPLRNQAGYFMLPTVITDIKDES 385

  Fly   414 TIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNV 478
            ....|||||||..::.|...:|||.|||:..|||||.|::||:.:.:.:...|::|.||.|.:.:
Mouse   386 RCMTEEIFGPVTCVVPFDSEEEVITRANSVRYGLAATVWSKDVGRIHRVAKKLQSGLVWTNCWLI 450

  Fly   479 LAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVK 514
            .....||||.|.||.|||..:.:...:||:|::.:|
Mouse   451 RELNLPFGGMKSSGIGREGAKDSYDFFTEIKTITIK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 175/487 (36%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 175/489 (36%)
Aldh8a1NP_848828.1 ALDH_F8_HMSADH 27..485 CDD:143412 171/465 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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