DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and ALDH3A1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_005256579.1 Gene:ALDH3A1 / 218 HGNCID:405 Length:570 Species:Homo sapiens


Alignment Length:364 Identity:104/364 - (28%)
Similarity:166/364 - (45%) Gaps:54/364 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 GKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAE----QTSLTA 221
            |:..|:    ..|..|.|..||                     :.||::||||:|    ..||.|
Human   229 GRAEPL----VKYPGHRPGSVC---------------------SAGNSVVLKPSELSENMASLLA 268

  Fly   222 LYIAQLVKEAGFPEGVVNVVPGFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTL 286
            ..|.|.:.:..:|  |:|  .|.......|...  .|.:.:||||.|||:|..|:.. :|..|||
Human   269 TIIPQYLDKDLYP--VIN--GGVPETTELLKER--FDHILYTGSTGVGKIIMTAAAK-HLTPVTL 326

  Fly   287 ELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVG 351
            |||||||..:..:.|:|.|.....:|.|.|.||.|.|......:..|.::.||: .:::.|...|
Human   327 ELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEK-LKKSLKEFYG 390

  Fly   352 NPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIA 416
            .....:.:.|..::....::::|:|     :|.|:..||:.....  .::.||:..||.....:.
Human   391 EDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGDAAT--RYIAPTILTDVDPQSPVM 448

  Fly   417 REEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDK------ANYIVGGLRAGTVWVNT 475
            :|||||||..::..:.|:|.|:..|..|..||..:|:.: ||      |....||:.|..|.|  
Human   449 QEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSN-DKVIKKMIAETSSGGVAANDVIV-- 510

  Fly   476 YNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVK 514
             ::.....||||...||.|..:|:.:...::..:|.:|:
Human   511 -HITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 103/360 (29%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 103/362 (28%)
ALDH3A1XP_005256579.1 ALDH-SF <248..564 CDD:299846 97/320 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.