DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and alh-2

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_503467.2 Gene:alh-2 / 187001 WormBaseID:WBGene00000108 Length:514 Species:Caenorhabditis elegans


Alignment Length:513 Identity:316/513 - (61%)
Similarity:398/513 - (77%) Gaps:3/513 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALLRSQAKNFAAAVANYSSLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQC 73
            :|||| |...:....|.|.||.........||.:|||||:..:||||.||.:||...:::|::..
 Worm     4 SLLRS-AVRASVQACNGSGLPPGLADFKPKYTSLFINNEFVDAKSGKTFEFVNPANGKLLAKVAE 67

  Fly    74 ADKEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSY 138
            .:::|:||||:||:.|||:||.|||||||.||.||.|||||||||:|.|||||:|||||||..:|
 Worm    68 GNRDDVDIAVEAAKKAFKIGSEWRRMDASHRGVLLNRLADLMERDRVILASLESLDNGKPYKEAY 132

  Fly   139 NVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPAL 203
            |:|||.:||..||:||:||||||||||:.||:|||||||||||||||||||||:||.||||.|||
 Worm   133 NIDLPISIKTFRYYAGYADKNHGKTIPVGGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLAPAL 197

  Fly   204 ATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGT-AGAALANHCDVDKVAFTGSTD 267
            |.|||:|:|.|.:|.|:||::|.|:|||.|||||||::||.|| ||.|:|:|.|||||||||||:
 Worm   198 AMGNTVVMKVAVKTPLSALHVASLIKEAQFPEGVVNIIPGRGTDAGEAIASHMDVDKVAFTGSTE 262

  Fly   268 VGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDK 332
            |||.|..|:..:|:|:||||||||||||:.:|.|::.||..:|..||||.||||.||||||||.|
 Worm   263 VGKTIMKAAAESNVKKVTLELGGKSPNIVFADADLEEAVRQSHHALFFNQGQCCSAGSRTFVEGK 327

  Fly   333 IYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLP 397
            ||||||.::.|..:|..:|:|||.||.||||::|.|:|.|:..|::|||:||:||.||.: .|..
 Worm   328 IYDEFVAKAKELVEKTVIGDPFDENTTQGPQIDESQVETIMKYIESGKKEGAQLVTGGVK-HGDQ 391

  Fly   398 GYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYI 462
            ||||:||:||:|.|.|.||:|||||||..:|||..::|:||:|||:.|||||.|.|.||:||..:
 Worm   392 GYFVKPTIFANVNDQMKIAQEEIFGPVMIVIRFDSMEELIEKANNTIYGLAAGVVTNDLNKALQV 456

  Fly   463 VGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVAQKNS 520
            ...:|||:||||.|:|....|||||:|.||.|||.|||.|:.|||||:|.:||.||||
 Worm   457 ANTIRAGSVWVNCYDVFDPAAPFGGFKQSGIGRELGEYGLAAYTEVKTVTIKVPQKNS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 309/503 (61%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 301/480 (63%)
alh-2NP_503467.2 ALDH_F1-2_Ald2-like 34..507 CDD:143410 300/473 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 639 1.000 Domainoid score I76
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55480
Inparanoid 1 1.050 673 1.000 Inparanoid score I375
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53964
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 1 1.000 - - otm14082
orthoMCL 1 0.900 - - OOG6_100163
Panther 1 1.100 - - O PTHR11699
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X158
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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