DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and alh-10

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_509203.1 Gene:alh-10 / 180979 WormBaseID:WBGene00000116 Length:506 Species:Caenorhabditis elegans


Alignment Length:517 Identity:196/517 - (37%)
Similarity:294/517 - (56%) Gaps:28/517 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RSQAKNFAAAVANYSSLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCADK 76
            |.:.||....:     :..|....|.|..  ||.||:  ::|.|:.:::||:|.:...:|.....
 Worm     7 REEFKNILQKL-----IDSPNEQHDPLTN--FIGNEF--ARSEKLMDSVNPSTGKPWIKIPDGTA 62

  Fly    77 EDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNVD 141
            .::|.||:||:.|||   .|::....:|..||.::|:|:|.....:|.||:.|.|||..::..:|
 Worm    63 REVDQAVEAAKEAFK---TWKKTTVQQRSALLNKVANLIEEFNDDIAILESRDQGKPIGLAKVMD 124

  Fly   142 LPTAIKNLRYFAGWADKNHGKTIPMD---GDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPAL 203
            :|..::|.|.||..|..:...:..::   |.|..|.:::||||.|.|.|||.|:.::::||.|||
 Worm   125 IPRCVQNFRDFANAALYSLSTSTILEQPTGKFVNYVKNDPVGVAGLISPWNLPLYLLSFKLAPAL 189

  Fly   204 ATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFG-TAGAALANHCDVDKVAFTGSTD 267
            ..|||:|.||:|.||:||..:....|..|||.||||:|.|.| :||..|.:|.||..::|||||.
 Worm   190 VAGNTVVCKPSEMTSVTAWVLMHAFKLVGFPPGVVNMVIGEGKSAGQRLVDHVDVPLISFTGSTV 254

  Fly   268 VGKLIQLASGNTNLKRVTLELGGKSPNIILSD---TDMDYAVETAHFGLFFNMGQCCCAGSRTFV 329
            :||.||......| |:|:||:|||:|.|:.|:   :|:.....::    |.|.|:.|...||.||
 Worm   255 IGKKIQEDGAKLN-KKVSLEMGGKNPGIVYSNYRKSDIASIARSS----FLNQGEICLCTSRLFV 314

  Fly   330 EDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGG--SR 392
            :..|:.:||:...|.|||.|||:| ....:.|...::...||:...|:..||:||.::.||  :.
 Worm   315 QKPIFADFVKSYVEEAKKFTVGDP-TTQVQIGAMNSKVHYEKVKSYIELAKKEGADILCGGVTTI 378

  Fly   393 PEGLP-GYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDL 456
            ..|.. |||:.|||...:.|...:..:||||||..:..|...:|||||||::.|||:|.|::.|.
 Worm   379 QNGCENGYFITPTVIVGLHDASKVMTDEIFGPVVCITPFDTAEEVIERANSTPYGLSATVWSSDS 443

  Fly   457 DKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVAQK 518
            |:.......|||||||.||:.......||||.|.||:|||....:|..|::.|:|.|.:|.|
 Worm   444 DELLNTANELRAGTVWCNTWLARDLSMPFGGCKQSGNGREGLHDSLHFYSDAKTVCVNIAAK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 192/509 (38%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 189/489 (39%)
alh-10NP_509203.1 ALDH_F8_HMSADH 45..500 CDD:143412 181/463 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.