DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and Aldh3a2

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001318043.1 Gene:Aldh3a2 / 11671 MGIID:1353452 Length:507 Species:Mus musculus


Alignment Length:466 Identity:128/466 - (27%)
Similarity:208/466 - (44%) Gaps:84/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 RNAFKLGSPWRRMDASERGR-LLYRLADL-------MERDQVYLASLETLDNGKPYSMSYNVDLP 143
            |.||:.|          |.| |.:||..|       .||::..||:: ..|..|....:|:.::.
Mouse     9 RQAFRSG----------RSRPLRFRLQQLEALRRMVQEREKEILAAI-AADLSKSELNAYSHEVI 62

  Fly   144 TAIKNLRYFAG---------WADKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKL 199
            |.:..:.:..|         .|.||   .:.|..:  .|.:.||:||...|..||:|.::....|
Mouse    63 TILGEIDFMLGNLPELASARPAKKN---LLTMMDE--AYVQPEPLGVVLIIGAWNYPFVLTMQPL 122

  Fly   200 GPALATGNTIVLKPAEQTSLTALYIAQLVKE-----------AGFPEGVVNVVPGFGTAGAALAN 253
            ..|:|.||..::||:|.:..||..:|:|:.:           .|.||....:...|         
Mouse   123 VGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYAIVNGGIPETTELLKQRF--------- 178

  Fly   254 HCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMG 318
                |.:.:||:|.|||::..|:.. :|..||||||||||..|..|.|:|.|.....:|.:.|.|
Mouse   179 ----DHILYTGNTAVGKIVMEAAAK-HLTPVTLELGGKSPCYIDRDCDLDVACRRIAWGKYMNCG 238

  Fly   319 QCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQ----VNEEQMEKILGMIKTG 379
            |.|.|......|..:.::.|::.     |.||.:.:..|.:..|.    :|....:::..::|  
Mouse   239 QTCIAPDYILCEASLQNQIVQKI-----KETVKDFYGENIKASPDYERIINLRHFKRLQSLLK-- 296

  Fly   380 KKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSE 444
               |.|:..||...|..  .::.||:..||..:..:.:||||||:..::..|.:||.|...|:.|
Mouse   297 ---GQKIAFGGEMDEAT--RYLAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVDEAINFINDRE 356

  Fly   445 YGLAAAVFTKDLDKANYIVGGLRAGTVWVN------TYNVLAAQAPFGGYKMSGHGRENGEYALS 503
            ..||..||:::......::....:|.|..|      |.|.|    ||||...||.|..:|:|:..
Mouse   357 KPLALYVFSRNNKLIKRVIDETSSGGVTGNDVIMHFTVNSL----PFGGVGASGMGAYHGKYSFD 417

  Fly   504 NYTEVKSVIVK 514
            .::..:..::|
Mouse   418 TFSHQRPCLLK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 127/462 (27%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 127/464 (27%)
Aldh3a2NP_001318043.1 ALDH_F3AB 5..444 CDD:143450 128/466 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.