DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and Aldh2

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_033786.1 Gene:Aldh2 / 11669 MGIID:99600 Length:519 Species:Mus musculus


Alignment Length:521 Identity:359/521 - (68%)
Similarity:426/521 - (81%) Gaps:3/521 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRVLKTGALLRSQAKNFAAAVANYSSLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTA 65
            |||...|......:.....:|.|. |::|.|...|::....:|||||||.:.|.|.|.|:||:|.
Mouse     1 MLRAALTTVRRGPRLSRLLSAAAT-SAVPAPNHQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTG 64

  Fly    66 EVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDN 130
            |||.::...:|||:|.||:|||.||:|||||||||||:|||||||||||:|||:.|||:||||||
Mouse    65 EVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDN 129

  Fly   131 GKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPILMM 195
            ||||.:||.|||...:|.|||:||||||.||||||:|||||:|||||||||||||||||||:||.
Mouse   130 GKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 194

  Fly   196 AWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFG-TAGAALANHCDVDK 259
            ||||||||||||.:|:|.||||.|||||:|.|:||||||.||||:||||| |||||:|:|..|||
Mouse   195 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDK 259

  Fly   260 VAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAG 324
            |||||||:||.|||:|:|::|||||||||||||||||:||.|||:|||.|||.||||.|||||||
Mouse   260 VAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAG 324

  Fly   325 SRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAG 389
            |||||::.:||||||||..|||.|.||||||..|||||||:|.|.:||||.||:|:::||||:.|
Mouse   325 SRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCG 389

  Fly   390 GSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTK 454
            |..... .|||:|||||.||:|.||||:|||||||.|:::||.::||:.|||:|:||||||||||
Mouse   390 GGAAAD-RGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTK 453

  Fly   455 DLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVKVAQKN 519
            |||||||:...|:|||||:|.|:|..||:|||||||||.|||.|||.|..|||||:|.|||.|||
Mouse   454 DLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQKN 518

  Fly   520 S 520
            |
Mouse   519 S 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 347/503 (69%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 343/480 (71%)
Aldh2NP_033786.1 PLN02466 3..518 CDD:215259 354/516 (69%)
ALDH_F1AB_F2_RALDH1 33..513 CDD:143459 343/480 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850246
Domainoid 1 1.000 699 1.000 Domainoid score I127
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55480
Inparanoid 1 1.050 733 1.000 Inparanoid score I604
Isobase 1 0.950 - 0 Normalized mean entropy S334
OMA 1 1.010 - - QHG53964
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 1 1.000 - - FOG0000158
OrthoInspector 1 1.000 - - otm43704
orthoMCL 1 0.900 - - OOG6_100163
Panther 1 1.100 - - LDO PTHR11699
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2025
SonicParanoid 1 1.000 - - X158
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

Return to query results.
Submit another query.