DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh and aldh1l1

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001185701.1 Gene:aldh1l1 / 100526683 ZFINID:ZDB-GENE-100519-4 Length:903 Species:Danio rerio


Alignment Length:480 Identity:224/480 - (46%)
Similarity:329/480 - (68%) Gaps:9/480 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VFINNEWHKSKSGKIFETINPTTAEVIAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERGR 106
            :|||.|:..::.||.:::||||..:.|.::..|...|::.||.||:.||:.|. |.:|:..:||:
Zfish   425 LFINGEFVDAEGGKTYKSINPTDGQAICDVSLAQISDVEKAVAAAKEAFEEGE-WGKMNPRDRGK 488

  Fly   107 LLYRLADLMERDQVYLASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMD---- 167
            |||:||||||:.|..||::|::|:|..|:::....:..:|:..||||||.||..|.|||::    
Zfish   489 LLYKLADLMEQHQEELATIESIDSGAVYTLALKTHIGMSIQTFRYFAGWCDKIQGCTIPINQARP 553

  Fly   168 GDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAG 232
            ....|:|:.||:||||.:||||:|::|:|||....||.|||:|||||:.|.||||..|:|...|.
Zfish   554 NRNLTFTKKEPIGVCGIVIPWNYPLMMLAWKTAACLAAGNTVVLKPAQVTPLTALKFAELTALAK 618

  Fly   233 FPEGVVNVVPGFGT-AGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNII 296
            ||:||||::||.|: .|..|::|.||.|:.|||||::||.|..:...:|:|:|:||||||||.||
Zfish   619 FPKGVVNILPGSGSLVGQRLSDHPDVRKLGFTGSTEIGKHIMKSCAVSNVKKVSLELGGKSPLII 683

  Fly   297 LSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQG 361
            .:|.|:|.||......:|||.|:.|.|..|.|:|:.|:|.|:||.....:|..:|:|.|.:|:.|
Zfish   684 FNDCDLDKAVRMGMSSVFFNKGENCIAAGRLFIEESIHDIFLERVVSEIRKMKIGDPLDRSTDHG 748

  Fly   362 PQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQ 426
            ||.::..::|::...:.|.|:|||||.||.:.| .||:|.:||||.||||.|.||.||.||||..
Zfish   749 PQNHKAHLDKLVEYCEKGVKEGAKLVCGGKQVE-RPGFFFEPTVFTDVQDHMYIAVEESFGPVMI 812

  Fly   427 LIRFK--KLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYK 489
            :.:|.  ::|:|::|||.:|:|||:.|||:|:.||.|:...|:||||::||||.....|||||:|
Zfish   813 ISKFSNGEVDKVLQRANATEFGLASGVFTRDISKALYVSEKLQAGTVFINTYNKTDVAAPFGGFK 877

  Fly   490 MSGHGRENGEYALSNYTEVKSVIVK 514
            .||.|::.|:.||:.|.:.|.|.|:
Zfish   878 QSGFGKDLGQEALNEYLKTKCVTVE 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 222/476 (47%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 223/478 (47%)
aldh1l1NP_001185701.1 Fmt 1..306 CDD:223301
FMT_core_FDH_N 1..203 CDD:187716
FDH_Hydrolase_C 206..307 CDD:187731
ALDH_F1L_FTFDH 418..903 CDD:143458 224/480 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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