DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh and aldh1l2

DIOPT Version :9

Sequence 1:NP_001260290.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_002938116.1 Gene:aldh1l2 / 100127737 XenbaseID:XB-GENE-5820495 Length:922 Species:Xenopus tropicalis


Alignment Length:511 Identity:239/511 - (46%)
Similarity:333/511 - (65%) Gaps:12/511 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LRSQAKNFAAAVANYSSLPQPQTTPDILYTGVFINNEWHKSKSGKIFETINPTTAEVIAEIQCAD 75
            ||.:.|.  ..|.:|:||.....|..:.|. .|||.::..:.:||.::|||||...||.::....
 Frog   416 LRGEDKE--ELVIDYASLNVNNMTVKMPYQ-CFINGQFADADNGKTYDTINPTDGSVICKVAYCS 477

  Fly    76 KEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGKPYSMSYNV 140
            ..|:|.||.||::||:.|. |.:|:|.:|||:|||||||||..|..||::|.:|:|..|:::...
 Frog   478 VADVDKAVAAAKDAFENGE-WGKMNARDRGRILYRLADLMEEHQEELATIEAIDSGAVYTLALKT 541

  Fly   141 DLPTAIKNLRYFAGWADKNHGKTIPMD----GDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGP 201
            .:..:::..||||||.||..|.|||::    ....|:|:.||:|||..:||||:|::|:|||...
 Frog   542 HVGMSVQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTKKEPLGVCAIVIPWNYPLMMLAWKSAA 606

  Fly   202 ALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGF-GTAGAALANHCDVDKVAFTGS 265
            .||.|||:|||||:.|.||||..|:|..:||.|:||:|::||. |..|..|:.|.|:.|:.||||
 Frog   607 CLAAGNTLVLKPAQVTPLTALKFAELAVKAGVPKGVINILPGSGGLVGQRLSEHPDIRKLGFTGS 671

  Fly   266 TDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCCAGSRTFVE 330
            |.:||.|..:...:|||:|:||||||||.||.:|.|:|.||......::||.|:.|.|..|.|||
 Frog   672 TPIGKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCDLDKAVRMGMGAVYFNKGENCIAAGRLFVE 736

  Fly   331 DKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEG 395
            :.|:||||.|..|..||..:|:|.|.:|:.|||.:...:||:|...:.|.|:||.||.|| |...
 Frog   737 ESIHDEFVTRVVEEIKKMRIGDPLDRSTDHGPQNHRAHLEKLLEYCEIGVKEGATLVYGG-RKVP 800

  Fly   396 LPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFK--KLDEVIERANNSEYGLAAAVFTKDLDK 458
            .||:|::||||.||:|.|.:|.||.|||:..:.:||  .:|.|:.||||:|||||:.|||||:.|
 Frog   801 RPGFFMEPTVFTDVEDHMYLAEEESFGPIMVISKFKDGDIDGVLRRANNTEYGLASGVFTKDISK 865

  Fly   459 ANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSVIVK 514
            |.|:...|.||||::||||.....|||||:|.||.|::.||.||..|...|:|.|:
 Frog   866 AMYVSEKLDAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEEALHEYLRTKAVTVE 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AldhNP_001260290.1 PLN02466 9..512 CDD:215259 237/507 (47%)
ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 231/486 (48%)
aldh1l2XP_002938116.1 FMT_core_FDH_N 23..225 CDD:187716
FDH_Hydrolase_C 228..327 CDD:187731
PP-binding 346..412 CDD:376348
ALDH_F1L_FTFDH 437..922 CDD:143458 232/488 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153834at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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