DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3748 and Lemd1

DIOPT Version :10

Sequence 1:NP_609281.1 Gene:CG3748 / 34252 FlyBaseID:FBgn0032110 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001298031.1 Gene:Lemd1 / 213409 MGIID:1922403 Length:203 Species:Mus musculus


Alignment Length:199 Identity:37/199 - (18%)
Similarity:65/199 - (32%) Gaps:64/199 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DIQRLTDAQLSTMCKSHGLILGPITFQNRRMAERKLHIAMITE--------RAKYRAHQ------ 65
            |::.|:|.:|.......|...|||....|:..|:|| :.::..        :...|.|.      
Mouse     3 DVKCLSDYELHKHLMKLGFTPGPILPSTRKTYEKKL-VQLLASPPWKPPVMKRPTRPHGSEDSDD 66

  Fly    66 ------QFALECNM----------KTQVPPAQQNYGLVDVLPQNYYQPMPPQ----TYWPSPGTN 110
                  :..|:.|:          |.::..:.....::|:    |....|.:    ...|||...
Mouse    67 SEDPAIKIILKGNIKFSKNKGKEGKKRLEASTNKRRILDI----YLSQKPTKKVRYAARPSPRIK 127

  Fly   111 LRSPPPPSWNTQNRRERTD----------PVLEPRQYVSWRQQNRNQKNTENSGNNFLGFKMPFS 165
            .|......::..|:|.::.          |...|.....|          |:|.||     :|:|
Mouse   128 RRCVSEEDYSRCNKRSKSSSPYQNPRNNFPCQNPEDSFLW----------ESSENN-----VPWS 177

  Fly   166 LGAA 169
            |..|
Mouse   178 LKLA 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3748NP_609281.1 LEM 14..57 CDD:128813 12/41 (29%)
Lemd1NP_001298031.1 LEM 3..42 CDD:460781 12/39 (31%)

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