DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat1 and Slc1a6

DIOPT Version :10

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_114454.2 Gene:Slc1a6 / 84012 RGDID:620340 Length:561 Species:Rattus norvegicus


Alignment Length:487 Identity:215/487 - (44%)
Similarity:303/487 - (62%) Gaps:53/487 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCLIVPLLVSSI 76
            :.|::.|...:.||..|.:|..:.|.::  ..:.|.|:|.|.|||||:.:|||:.|::||:|||:
  Rat    47 RRFLRRNAFILLTVSAVIIGVSLAFALR--PYQLSYRQIKYFSFPGELLMRMLQMLVLPLIVSSL 109

  Fly    77 TSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTESIDKASK--- 138
            .:.:..||...:.::..||..||.|||:.||.:||.:||.:.||:|:|      |.:.:..:   
  Rat   110 VTGMASLDNKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSK------EGLHREGRIET 168

  Fly   139 VLTPDTLMDLVRNMFTDNIIQSTMFQHRTEIYE-----------------NTSISPAQPMEN--- 183
            |.|.|..||||||||..|::::...|.:|: |.                 ..||||....||   
  Rat   169 VPTADAFMDLVRNMFPPNLVEACFKQFKTQ-YSTRVVTRTIVRTDNGSELGASISPPSSAENETS 232

  Fly   184 ---------------WEFKS-----AQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLS 228
                           ..|:.     ....|.|.||||:|||..|..||.|:.||::|:|||.:|:
  Rat   233 ILENVTRALGTLQEVISFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN 297

  Fly   229 EAMMTITSWVIWISPLGVAFLIAAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLG 293
            ||:|.:...:||.:|:|:.||||.||:|||.:|.....||.|.:||::|||||..|.:.:|:||.
  Rat   298 EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPLIYFLV 362

  Fly   294 TRRLPYRYIAKLSQVLATAFGTGSSSATMPLTIKCL-DNMGIDPRVTRFVIPVGATINMDGTALY 357
            |.|.|:.:|..:.|.|.||.||.|||||:|:|.:|| :.:|:|.|:||||:|||||:||||||||
  Rat   363 THRNPFPFIGGILQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVNMDGTALY 427

  Fly   358 EAVAALFIAQYREMSYSFGTIVAVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIA 422
            ||:||:||||......:.|.|..:||||||||:||||||||||||||:||.:|||..:|::||||
  Rat   428 EALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIA 492

  Fly   423 VDWLLDRFRTTINVMCDALGTILVNHLSKNDL 454
            |||.|||.||..||:.|::|..::.|||:.:|
  Rat   493 VDWFLDRLRTMTNVLGDSIGAAVIEHLSQREL 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 GltP 20..448 CDD:440912 209/471 (44%)
Slc1a6NP_114454.2 GltP 51..530 CDD:440912 214/483 (44%)

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