DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat1 and slc1a8b

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001177745.1 Gene:slc1a8b / 564474 ZFINID:ZDB-GENE-070912-552 Length:550 Species:Danio rerio


Alignment Length:474 Identity:210/474 - (44%)
Similarity:293/474 - (61%) Gaps:40/474 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCLIVPLLVSSI 76
            |.:.:.|.|...:|:.|..|.::||.:::.  ..|.:..:|.|||||:.:||||.||:||:.||:
Zfish    22 KDYCKRNGLLTLSVLAVMSGCVVGFTLRSL--NLSTQAKIYFSFPGELLMRMLKMLILPLITSSL 84

  Fly    77 TSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTESIDKA-SKVL 140
            .|.:..:|...|.::....||||..||..|||:||.||..:.||.|     |:.|....| ..|:
Zfish    85 MSGLSAMDTKASGRLGLLTITYYLWTTFIAVIVGIILVLIIHPGTG-----TEKEGHKAAGGPVM 144

  Fly   141 T-PDTLMDLVRNMFTDNIIQSTMFQHRTEI---------------------YEN--------TSI 175
            | .|.|:||:|||...|:|::|..|::||:                     |||        ..:
Zfish   145 TSADALLDLIRNMIPSNLIEATFQQYKTELVPNFKNSAKSSQANFVYIMPDYENPKMGHPVFLEL 209

  Fly   176 SPAQPMENWEFKSAQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIW 240
            :| .|..:::....:..|.||||:|:||..:|..:|||..:|..|.:....::|.:|.|.:..:|
Zfish   210 TP-PPEIHYKIVPGKSNGMNVLGIVIFSATMGLLLGRMGSRGSPLVNVCLCINECVMKIINAAMW 273

  Fly   241 ISPLGVAFLIAAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKL 305
            ..|.|:.||:|.||::|...|...:.||.|||||:.|||:||...:.:.||:.||:.|:.||..|
Zfish   274 YFPFGIVFLVAGKILDMHDPAVLAEKLGMYFITVLAGLFVHGVILLPLFFFVFTRKNPFSYIRGL 338

  Fly   306 SQVLATAFGTGSSSATMPLTIKC-LDNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYR 369
            .|.|..|..|.|||||:|:|:|| |:|..:|.::.|||:|||||||||||||||||||:||||..
Zfish   339 LQALVIALATSSSSATLPITMKCLLENCHVDRKIARFVLPVGATINMDGTALYEAVAAIFIAQVN 403

  Fly   370 EMSYSFGTIVAVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTI 434
            |....||.:|.:|||||||||||||||||||||||:||.:|||.|.|:|||:|:||:||||||.|
Zfish   404 EYELDFGQLVTISITATAASIGAAGIPQAGLVTMVIVLTSVGLPPDDISLIVAIDWILDRFRTMI 468

  Fly   435 NVMCDALGTILVNHLSKND 453
            ||:.|||...::.|:.:.|
Zfish   469 NVLGDALAAGIMAHVCRKD 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 206/460 (45%)
slc1a8bNP_001177745.1 SDF 30..482 CDD:278787 206/459 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 397 1.000 Domainoid score I716
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 415 1.000 Inparanoid score I1797
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm24560
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.980

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