DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat1 and slc1a2a

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001177234.1 Gene:slc1a2a / 560802 ZFINID:ZDB-GENE-100422-11 Length:548 Species:Danio rerio


Alignment Length:523 Identity:213/523 - (40%)
Similarity:320/523 - (61%) Gaps:41/523 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCLIVPLLVSSITSA 79
            :.:|:|...||:||..|.:.|.:::.:: ......||.|:|||:|.:||||.:|:||::||:.:.
Zfish    32 LMKNLLLTLTVLGVITGSVAGILLRYAS-PLPADVIMVIAFPGDILMRMLKMVILPLIISSLITG 95

  Fly    80 IGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTESIDKASKVLTPDT 144
            :.|||...|.::.|||:.||..||:.|.:||:.||..:.|| ..|:.....|. .|..:|.:.|.
Zfish    96 LAGLDAKSSGRLGTRAMIYYMSTTVIAAVLGVILVLLIHPG-NPKLKANLGEG-KKNDEVSSLDA 158

  Fly   145 LMDLVRNMFTDNIIQSTMFQHRTEIYENTSISPAQP-----------------MENWEFKSAQRE 192
            ..||:||:|.:|::|: .||....:.....|:|..|                 .::.:|||    
Zfish   159 FFDLIRNLFPENLVQA-CFQQIQTVTTKVEIAPPPPPTRFGRNATKGAAKYVIKKSLQFKS---- 218

  Fly   193 GSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWISPLGVAFLIAAKIIEM 257
            |.||||::.|.|..|..:|:|.||.:|:.|||.||:|.:|.:...::|.||:|:|.||..|||.:
Zfish   219 GMNVLGIIGFFVAFGICMGKMGEKAKLMVDFFNTLNEIVMRLVGMIMWYSPIGIACLICGKIISI 283

  Fly   258 ESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLATAFGTGSSSATM 322
            ..:....:.||.|.:||::||.:||...:.:|:|:..|:.|:::...|.|...||.||.||:.|:
Zfish   284 NDLEMVAKQLGMYMVTVIVGLIIHGGIFLPLIYFVIVRKNPFKFFMGLFQAWVTALGTASSAGTL 348

  Fly   323 PLTIKCL-DNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREMSYSFGTIVAVSITAT 386
            |:|.:|| :|:|||.||||||:|||||||||||||||||||:||||...:....|.||.||:|||
Zfish   349 PVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGIELDPGQIVTVSLTAT 413

  Fly   387 AASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINVMCDALGTILVNHLSK 451
            .||:|||.||.||||||:::|..|||..:|:||::|||||||||||::||:.|:.|..:|.||||
Zfish   414 LASVGAASIPSAGLVTMLLILTAVGLPTQDISLLVAVDWLLDRFRTSVNVIGDSYGAGIVYHLSK 478

  Fly   452 NDLASVDRLNAEPHELLELGPNGHEMKEXR-----QSSLGAYNRKRXVDMSRLWACFHILPSNDS 511
            ::|   |..:|:     ::.|:..||.:.:     .|:.|.|:  ......::..|...|.||.|
Zfish   479 DEL---DMFDAQ-----QIRPDDFEMAKTQSYYENNSNHGVYH--NSCQPIQIDDCKVTLASNGS 533

  Fly   512 DSD 514
            .::
Zfish   534 PAE 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 194/446 (43%)
slc1a2aNP_001177234.1 SDF 46..476 CDD:278787 189/437 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm24560
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.830

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