DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat1 and slc1a2b

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_956273.2 Gene:slc1a2b / 335836 ZFINID:ZDB-GENE-030131-7779 Length:562 Species:Danio rerio


Alignment Length:499 Identity:206/499 - (41%)
Similarity:312/499 - (62%) Gaps:29/499 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RPKQDGGKFKAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCL 67
            ||....|.....|::|:|...||:||.:|.:.|.:::.:: ......:|.|:|||:|.:||||.|
Zfish    21 RPLSKWGTICQKMRKNLLLTLTVMGVIMGAVSGMLLRVAS-PIDDNIVMVIAFPGDILMRMLKML 84

  Fly    68 IVPLLVSSITSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTES 132
            |:||::||:.:.:.|||...|.::.:||:.||..||:.|.:||:.||..:.|| ..|:.|...|.
Zfish    85 ILPLIISSLITGLAGLDAKSSGRLGSRAMIYYMTTTVIAAVLGVILVLLIHPG-NPKLKENLGEG 148

  Fly   133 IDKASKVLTPDTLMDLVRNMFTDNIIQSTMFQHRTEI--------YENTSISPAQPMEN------ 183
            ::. .:|.:.|...||:||:|.:|::|:...|.:|.:        .::|:.:.::.:.|      
Zfish   149 LEN-DEVSSLDAFFDLIRNLFPENLVQACFQQIQTVVKKVEVQPDLDDTNSTMSEYLSNATKPPP 212

  Fly   184 --WEFKSAQ-REGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWISPLG 245
              .:.||.| :.|.|||||:.|.:..|..:|:|.||.:|:.|||..|:|.:|.:...::|.||.|
Zfish   213 IFKDKKSLQFKSGMNVLGLIGFFIAFGICMGKMGEKARLMIDFFNILNEIVMKLVIMIMWYSPFG 277

  Fly   246 VAFLIAAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLA 310
            :|.||..|||.::.:....:.||.|.|||::||.:||...:..|:|...|:.|:.:...:.|...
Zfish   278 IACLICGKIISIKDLEVVARQLGMYMITVIVGLIIHGAIFLPCIYFAIVRKNPFSFFMGIFQAWI 342

  Fly   311 TAFGTGSSSATMPLTIKCL-DNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREMSYS 374
            ||.||.||:.|:|:|.:|| :|:|||.||||||:|||||||||||||||||||:||||...:...
Zfish   343 TALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGIDLD 407

  Fly   375 FGTIVAVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINVMCD 439
            .|.||.||:|||.||:|||.||.||||||:::|..|||..:|:||::|||||||||||::||:.|
Zfish   408 PGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTQDISLLVAVDWLLDRFRTSVNVVGD 472

  Fly   440 ALGTILVNHLSKNDLASVDRLNAEPHELLELGPNGHEMKEXRQS 483
            :.|..:|.||||.:|.::|..:.:..::        ||....||
Zfish   473 SYGAGIVYHLSKAELDALDAQHGKTDDI--------EMMTKTQS 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 191/446 (43%)
slc1a2bNP_956273.2 SDF 38..482 CDD:278787 191/446 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm24560
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.830

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