DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat1 and Slc1a1

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_033225.1 Gene:Slc1a1 / 20510 MGIID:105083 Length:523 Species:Mus musculus


Alignment Length:477 Identity:216/477 - (45%)
Similarity:309/477 - (64%) Gaps:23/477 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTRPKQDGGKFKAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLK 65
            |.:|...|..::.|::.:.|.::||..|.:|.::|.:::..: |.|..:..|.:|||||.:||||
Mouse     1 MGKPTSSGCDWRRFLRNHWLLLSTVAAVVLGIVLGVVVRGHS-ELSNLDKFYFAFPGEILMRMLK 64

  Fly    66 CLIVPLLVSSITSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQT 130
            .:|:||:|||:.:.:..||.::|.||..||:.|||.||:.||||||.||.:::||...|:  ...
Mouse    65 LVILPLIVSSMITGVAALDSNVSGKIGLRAVVYYFSTTVIAVILGIVLVVSIKPGVTQKV--NDI 127

  Fly   131 ESIDKASKVLTPDTLMDLVRNMFTDNIIQSTMFQHR----------------TEIYENTSISPAQ 179
            ....|..:|.|.|.::||:||||.:|::|:...|::                ||:...|:::...
Mouse   128 NRTGKTPEVSTMDAMLDLIRNMFPENLVQACFQQYKTKREEVKPVGDPGGNATEVSVTTAMTTMS 192

  Fly   180 PMENWEFK--SAQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWIS 242
            ..:..|:|  ....:|.|||||::|.::.|..||:|.||||:|.|||..||:|.|.|...::...
Mouse   193 ENKTKEYKIVGLYSDGINVLGLIIFCLVFGLVIGKMGEKGQILVDFFNALSDATMKIVQIIMCYM 257

  Fly   243 PLGVAFLIAAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQ 307
            |:|:.||||.||||:|. ....:.||.|..||:.||.:|....:.:::|:..|:.|:|:...::|
Mouse   258 PIGILFLIAGKIIEVED-WEIFRKLGLYMATVLSGLAIHSLIVLPLLYFIVVRKNPFRFALGMAQ 321

  Fly   308 VLATAFGTGSSSATMPLTIKCLDNMG-IDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREM 371
            .|.||....|||||:|:|.:|.:... :|.|:||||:|||||||||||||||||||:||||...:
Mouse   322 ALLTALMISSSSATLPVTFRCAEEKNQVDKRITRFVLPVGATINMDGTALYEAVAAVFIAQLNGL 386

  Fly   372 SYSFGTIVAVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINV 436
            ..|.|.||.:|||||||||||||:|||||||||:||..|||..:||:||||||||||||||.:||
Mouse   387 DLSIGQIVTISITATAASIGAAGVPQAGLVTMVIVLSAVGLPAEDVTLIIAVDWLLDRFRTMVNV 451

  Fly   437 MCDALGTILVNHLSKNDLASVD 458
            :.||.||.:|..|||.:|..:|
Mouse   452 LGDAFGTGIVEKLSKKELEQMD 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 207/447 (46%)
Slc1a1NP_033225.1 SDF 51..464 CDD:278787 199/415 (48%)
Aspartate binding. /evidence=ECO:0000250|UniProtKB:P43003 330..332 0/1 (0%)
Aspartate binding. /evidence=ECO:0000250|UniProtKB:P43003 410..414 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 389 1.000 Domainoid score I784
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 402 1.000 Inparanoid score I1910
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm43973
orthoMCL 1 0.900 - - OOG6_100309
Panther 1 1.100 - - LDO PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.880

Return to query results.
Submit another query.