DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat1 and glt-4

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_509075.3 Gene:glt-4 / 188744 WormBaseID:WBGene00001622 Length:499 Species:Caenorhabditis elegans


Alignment Length:492 Identity:206/492 - (41%)
Similarity:304/492 - (61%) Gaps:39/492 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCLIVPLLVSSITSAI 80
            :||:|.:.||:||.||..:||.:::.:..||||.:.|:.|||::|::|||.||:|:::|||.:::
 Worm     6 KENLLLLFTVLGVVVGIGLGFSLRDPSKAWSKRHLSYLRFPGDLFVQMLKMLILPMIMSSIITSL 70

  Fly    81 GGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTESIDKASKVLTP--- 142
            ..||...:.::...::.||.:||..||.|||.||:.::||:.     |.|...|....|.|.   
 Worm    71 ASLDSGTAGRLGMVSMIYYTLTTFFAVFLGIVLVSVIKPGKW-----TTTNIEDLVGHVKTTPCV 130

  Fly   143 ----DTLMDLVRNMFTDNIIQST---------MFQHRTEIYEN--TSISPAQPMENWEF-KSAQR 191
                ||::||:::.|.:|:|::|         .|...|||...  .::||.|..:..|. :....
 Worm   131 ATAVDTIIDLMKSCFPENLIEATFRSQKICLKFFNGTTEIPPEIAMTMSPEQRAQFTEVPEKIVS 195

  Fly   192 EGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWISPLGVAFLIAAKIIE 256
            :|.|:||||:|||.||..||.:.|.|:.:::||.:|....|.:..|||..||:|:.|||||:|:.
 Worm   196 DGMNILGLVVFSVALGIVIGVIGEDGKPMKNFFKSLEACSMKLIGWVIIYSPVGITFLIAAQIVG 260

  Fly   257 MESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLATAFGTGSSSAT 321
            |:.....:..|..|.|||::||.:|.|..|.::..:..||.|.:::..::|.|.||..|.|||||
 Worm   261 MKDPGQELHRLMGYVITVILGLLIHAFVVIPLLCVVLARRNPIKFVGGMAQALLTALATSSSSAT 325

  Fly   322 MPLTIKCL-DNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREMSYSFGTIVAVSITA 385
            :||:|||. :|..:||||||||:|:|||||||||||||||||::|:|......|.|.:|.||:||
 Worm   326 LPLSIKCCEENNKVDPRVTRFVLPLGATINMDGTALYEAVAAIYISQCYGNDLSLGEVVLVSLTA 390

  Fly   386 TAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINVMCDALGTILV---- 446
            |.||||||||||||:|||:|||..:||......||..||::|||.|||:||..|::.|.::    
 Worm   391 TLASIGAAGIPQAGIVTMIMVLIAIGLPTNLFILIFPVDFMLDRLRTTVNVHGDSIATAVIERLC 455

  Fly   447 --------NHLSKNDLA-SVDRLNAEPH-ELLELGPN 473
                    :||..||.. |:...||.|. :.:.:|.|
 Worm   456 EDQLQKGGHHLDTNDQGYSMLSTNASPDPKRITIGNN 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 194/460 (42%)
glt-4NP_509075.3 SDF 10..454 CDD:278787 194/448 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158393
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100309
Panther 1 1.100 - - LDO PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.760

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