DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat1 and glt-5

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_496094.1 Gene:glt-5 / 174530 WormBaseID:WBGene00001623 Length:491 Species:Caenorhabditis elegans


Alignment Length:499 Identity:198/499 - (39%)
Similarity:312/499 - (62%) Gaps:23/499 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KQDGGKFKAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCLIV 69
            |:...::.:::.:|:|.:.|:.|:.:|.:||.:::  |.:.|...|.|:.||||:|:.|||.:::
 Worm     6 KKSVSRWTSWLTKNMLLLMTMAGIVMGVIIGGVLR--TADPSPDVIRYVGFPGELFMNMLKAMVL 68

  Fly    70 PLLVSSITSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTESID 134
            ||:.:||.|.:..||...|.::.:||:.||.:||..||||||.:|:.::||......:...:...
 Worm    69 PLIAASIVSGLSQLDGKTSGRLGSRAVMYYAITTTHAVILGIIVVSIIQPGDPTIKQKMGYDKEG 133

  Fly   135 KASKVLTPDTLMDLVRNMFTDNIIQSTMFQHRTEIYENTSISPAQPMENWEFKSAQREGSNVLGL 199
            :|:.|......:||.||.|.:||:::|..|.:|. |.|.:.|.....|  ...:...:|.||||:
 Worm   134 EAANVSAAQKFLDLFRNAFPENIMRATFSQVQTN-YINQTHSNGATHE--VLHTGYVDGMNVLGI 195

  Fly   200 VMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWISPLGVAFLIAAKIIEMESIAATI 264
            ::|.:::|..:.|:.|:.:.|.:.|..|...:..:...::|:.|:|:..|||.|::|:..:..|.
 Worm   196 IVFCIVMGLVVSRIGEEAKALANLFHALDVVITRMVMLIMWLGPIGIPSLIAQKMLEVSDLWLTA 260

  Fly   265 QSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLATAFGTGSSSATMPLTIKCL 329
            :.||.:..||::||.:..|.|:.:|:|:|||..||.::..|.|.:.||.||.||:|::|:|.:||
 Worm   261 RMLGLFVFTVILGLAIQAFITLPLIYFIGTRHNPYTFLKGLGQAIMTALGTSSSAASLPVTFRCL 325

  Fly   330 DNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREMSYSFGTIVAVSITATAASIGAAG 394
            :.:|||||||:||:||||.:||||||||||.|::||||...:..|.|.||.||||||.||||||.
 Worm   326 NKLGIDPRVTKFVLPVGAMVNMDGTALYEATASIFIAQMNGLELSIGQIVTVSITATLASIGAAS 390

  Fly   395 IPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINVMCDALGTILVNHLSKNDLASVDR 459
            ||.||||||::||..:||...|:|||:||||.|||.||::||:.||||...|:|:      ..|.
 Worm   391 IPSAGLVTMLIVLTALGLPANDISLILAVDWFLDRLRTSVNVIGDALGCGFVHHI------CADH 449

  Fly   460 LNAE------PHELLEL-GPNGHEM-KEXRQSSLGAYNRKRXVD 495
            |||:      .|.::|. |.|..|: || .|.:    |.:: ::
 Worm   450 LNADVAEAEKNHAVVEAHGVNFDELEKECEQEN----NNQKQIE 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 182/428 (43%)
glt-5NP_496094.1 SDF 21..442 CDD:278787 181/425 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm14639
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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