DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat1 and slc1a1

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:XP_002934228.2 Gene:slc1a1 / 100498100 XenbaseID:XB-GENE-1011544 Length:529 Species:Xenopus tropicalis


Alignment Length:485 Identity:219/485 - (45%)
Similarity:311/485 - (64%) Gaps:34/485 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTRPKQDGGKFKAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLK 65
            |.:..:.|...|..::.|.|.:.|::.|.:|..:|.::: ..|:.|..:.:|.:|||||.:||||
 Frog     1 MGKKMKRGCDCKRILKNNWLLITTIVAVVLGIGLGVLVR-EYGKLSNLDKIYFAFPGEILMRMLK 64

  Fly    66 CLIVPLLVSSITSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQT 130
            .:|:||:|||:.:.:..||.|:|.||..|||.|||.||:.||||||.||.:::||     |....
 Frog    65 LIILPLIVSSMITGVAALDSSVSGKIGLRAIVYYFCTTVIAVILGIVLVVSIKPG-----VSQSA 124

  Fly   131 ESIDKAS---KVLTPDTLMDLVRNMFTDNIIQSTMFQHRTEIYE---------------NTSISP 177
            :.||:..   :|.|.|.|:||:||||.:|::|:...|::|:..|               |.:|..
 Frog   125 DEIDRTGSTPEVTTVDALLDLLRNMFPENLVQACFQQYKTKREELKPSKEPDKNSTVEGNYTIDL 189

  Fly   178 A------QPMENWEFK--SAQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTI 234
            |      |..::.|:|  ....:|.|||||::|.::.|..||:|.||||:|.|||..|::|.|.|
 Frog   190 ALLALADQQNKSKEYKIVGLYTDGVNVLGLIVFCLVFGIVIGKMGEKGQVLVDFFNALNDATMQI 254

  Fly   235 TSWVIWISPLGVAFLIAAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPY 299
            ...::|..|:|:.||||.||||:.. ....:.||.|..||:.||.:|....:.:|:.:..|:.|:
 Frog   255 VQIIMWYMPVGILFLIAGKIIEVND-WEIFRKLGLYMATVLSGLAIHSIVILPLIYLIIVRKNPF 318

  Fly   300 RYIAKLSQVLATAFGTGSSSATMPLTIKCLDNMG-IDPRVTRFVIPVGATINMDGTALYEAVAAL 363
            |:...::|.|.||....|||||:|:|.:|.:... :|.|:||||:|||||||||||||||||||:
 Frog   319 RFAMGMAQALLTALMISSSSATLPVTFRCAEEKNRVDKRITRFVLPVGATINMDGTALYEAVAAV 383

  Fly   364 FIAQYREMSYSFGTIVAVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLD 428
            ||||..:|:...|.||.:|:||||||:||||:|||||||||:||..|||..:||:||||||||||
 Frog   384 FIAQLNDMNLDVGQIVTISVTATAASVGAAGVPQAGLVTMVIVLSAVGLPAEDVTLIIAVDWLLD 448

  Fly   429 RFRTTINVMCDALGTILVNHLSKNDLASVD 458
            ||||.:||:.||.||.:|..|||.:|..:|
 Frog   449 RFRTMVNVLGDAFGTGIVEKLSKRELELMD 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 210/455 (46%)
slc1a1XP_002934228.2 SDF 20..469 CDD:395299 210/455 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 391 1.000 Domainoid score I776
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 405 1.000 Inparanoid score I1853
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm49148
Panther 1 1.100 - - LDO PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.080

Return to query results.
Submit another query.