DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat1 and slc1a7b

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001177689.1 Gene:slc1a7b / 100463517 ZFINID:ZDB-GENE-101111-7 Length:580 Species:Danio rerio


Alignment Length:482 Identity:213/482 - (44%)
Similarity:298/482 - (61%) Gaps:44/482 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KFKAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCLIVPLLVS 74
            :.|...::|.|.:.:|:.|.:|.|:||.:::.  ..|::|:.|..||||:.:||||.||:||:||
Zfish    11 RVKGVCKQNGLLILSVLAVVIGCLLGFFLRSK--NLSEQEVKYFQFPGELLMRMLKMLILPLVVS 73

  Fly    75 SITSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTESIDKASKV 139
            |:.|.:..||...||::....::||..||..||::||.:|..:.||..|:    :.:|.|....:
Zfish    74 SLMSGLAALDAKCSSRLGLITVSYYLWTTFLAVVVGIVMVLIIHPGGMAQ----KEDSEDSGKPI 134

  Fly   140 L-TPDTLMDLVRNMFTDNIIQSTMFQHRTE-------------------------IY-----ENT 173
            : :.|.|:||:||||..|::|:|..|:||.                         ||     ..|
Zfish   135 MSSADALLDLIRNMFPANLVQATFQQYRTNSVPIMKAPKTTVATSLAESTTRRALIYGIQDDNGT 199

  Fly   174 SISPAQ----PMENWEFKS--AQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMM 232
            .|...|    |..:..|::  ...||.||||:|:||..:|..:|||...|..|.:|..:|:||::
Zfish   200 DIQNFQLDLTPPPDVVFRTLPGTSEGMNVLGIVIFSATMGIMLGRMGPNGSALVNFCQSLNEAVL 264

  Fly   233 TITSWVIWISPLGVAFLIAAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRL 297
            .|.:.|||..|.|:.||:|.||:||...:|..:.||:|.|||::||.|||...:..::|..|::.
Zfish   265 KIVAIVIWYFPFGIVFLVAGKILEMSDPSAMGKKLGFYAITVVMGLILHGLFILPSMYFFITKKS 329

  Fly   298 PYRYIAKLSQVLATAFGTGSSSATMPLTIKC-LDNMGIDPRVTRFVIPVGATINMDGTALYEAVA 361
            |..||..:.|.|..:..|.|||||:|:|.|| |:|..||.|:.|||:||||||||||||||||||
Zfish   330 PIVYIRGILQALLISLATSSSSATLPITFKCLLENNHIDRRIIRFVLPVGATINMDGTALYEAVA 394

  Fly   362 ALFIAQYREMSYSFGTIVAVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWL 426
            |:||||.......||.|:.:|||||||||||||||||||||||:||.:|||...|::|||||||.
Zfish   395 AIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWA 459

  Fly   427 LDRFRTTINVMCDALGTILVNHLSKND 453
            ||||||.:|||.|||.|.::.|:.:.|
Zfish   460 LDRFRTMVNVMGDALATGIMAHICRKD 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 209/466 (45%)
slc1a7bNP_001177689.1 SDF 21..482 CDD:278787 209/466 (45%)
RNA_polI_A34 <529..>571 CDD:285426
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 397 1.000 Domainoid score I716
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 415 1.000 Inparanoid score I1797
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm24560
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.980

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