DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eaat1 and slc1a4

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001096391.1 Gene:slc1a4 / 100124992 XenbaseID:XB-GENE-980499 Length:537 Species:Xenopus tropicalis


Alignment Length:509 Identity:184/509 - (36%)
Similarity:304/509 - (59%) Gaps:34/509 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PKQ----DGGKFKAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRML 64
            ||:    :|.:...|:::|.:.:.||.||.||..:|..::..  ..:|.::.|.:||||:.||||
 Frog    32 PKKKKAAEGHRCAQFLKKNAIVILTVSGVLVGVGLGTAVRKM--NLTKAQMSYFAFPGEMLLRML 94

  Fly    65 KCLIVPLLVSSITSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQ 129
            |.:|:||:|.|:.|....||.....|:...|:.|:.|||:.|..|.|.|...::||.||..:.:.
 Frog    95 KMIILPLVVCSLISGAASLDTRSLGKLGGIAVAYFLVTTLMASGLAIALGFIIKPGAGAGALNSN 159

  Fly   130 TESIDKA--SKVLTPDTLMDLVRNMFTDNIIQSTMFQHRTE---IYENTS---ISPAQPMENWEF 186
            ...|::|  :...|.|:.:||.||:...|::.:......|:   ..:||:   |:...|:     
 Frog   160 ELGIEEALSTNKETVDSFLDLARNLMPSNLVAAAFRSFATDYKTFTKNTTDGLITEKVPI----- 219

  Fly   187 KSAQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWISPLGVAFLIA 251
             ..:.||.|:||||:|:::||..:.::..:|:.|..||...:||.|.:.||::|..|:|:.||:.
 Frog   220 -GTEVEGMNILGLVLFALVLGVALKKLGPEGEELIRFFNAFNEATMVLVSWIMWYVPIGIMFLVG 283

  Fly   252 AKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLATAFGTG 316
            :||:||.:|...:.|||.|.:..::|..:||...:.:|:|..||:.||.::..|....||||.|.
 Frog   284 SKIVEMGNIVLLVTSLGKYIMASILGHVIHGGIVLPLIYFAFTRKNPYTFLLGLITPFATAFATS 348

  Fly   317 SSSATMPLTIKCL-DNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREMSYSFGTIVA 380
            |||||:|..|||: :|.|:|.|::||::|:|||:||||.|:::.:||:||||......:.|.|..
 Frog   349 SSSATLPTMIKCIEENNGVDKRISRFILPIGATVNMDGAAIFQCMAAVFIAQMNSAELNAGQIFT 413

  Fly   381 VSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINVMCDALGTIL 445
            :.:||||:|:||||||..|::|:.::|:.:||...|:|||:||||::||..|.:||..||||..:
 Frog   414 ILVTATASSVGAAGIPAGGVLTIAIILEAIGLPTNDLSLILAVDWIVDRTTTVVNVEGDALGAGI 478

  Fly   446 VNHLSKNDLASVDRLNAEPHEL----LELGPNGHEMKEXRQSSLGAYNRKRXVD 495
            ::||::.:.|.      :.:||    :|..||   :|...::|....:|:...|
 Frog   479 LHHLNQKESAK------KQYELTDVYVEAVPN---LKSEEETSPLVMHRENPSD 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 167/437 (38%)
slc1a4NP_001096391.1 SDF 52..482 CDD:278787 167/437 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 391 1.000 Domainoid score I776
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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