DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eaat1 and slc1a5

DIOPT Version :9

Sequence 1:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001177684.1 Gene:slc1a5 / 100002129 ZFINID:ZDB-GENE-070501-4 Length:539 Species:Danio rerio


Alignment Length:479 Identity:180/479 - (37%)
Similarity:296/479 - (61%) Gaps:28/479 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TRPKQDGGKFKAFMQENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKC 66
            :.|:....|.|.|:..|:|.:.||..|.||.|||..::|:  ..|:.:|:|..||||:.:|:||.
Zfish    35 SEPESTAQKVKRFVLANLLVILTVSAVIVGVLIGLGVRNA--GLSRTQIIYFGFPGELLIRLLKM 97

  Fly    67 LIVPLLVSSITSAIGGLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQG----AKIVE 127
            :|:||:|.|:.|....:|.....|:...|:.::.|||:.|..:|:.:...:.||..    :::..
Zfish    98 IIIPLVVCSLVSGAASIDPKALGKLGGWAMLFFLVTTLIASAIGVIMAFIIHPGSSDGKMSQLNA 162

  Fly   128 TQTESIDKASKVLTPDTLMDLVRNMFTDNIIQSTMFQHRTEIYE------NTSISPAQ-PMENWE 185
            ....|:.:|..|:  |:.:||:||:|..|:: :..||.....|:      |:|:...: |:    
Zfish   163 QDDSSVPEAKDVI--DSFLDLIRNIFPSNLV-AAAFQSYATGYKFVKNDTNSSVLLEKVPV---- 220

  Fly   186 FKSAQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWISPLGVAFLI 250
              ....:|.|:|||::|::..|..:.::.|:|.:|..||.:.:||.|.:.||::|.:|||:.||:
Zfish   221 --GTDVDGMNILGLIVFAMAFGVALRKLGEEGVILMKFFNSFNEATMVLVSWIMWYAPLGIMFLV 283

  Fly   251 AAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLATAFGT 315
            ||||:|||.::....|||.|....:||..:||...:.:|:|:.||:.||.::..|...|||||||
Zfish   284 AAKIVEMEDVSLLFTSLGKYIACCVIGHAIHGLLVLPLIYFIITRKNPYTFLLGLVTALATAFGT 348

  Fly   316 GSSSATMPLTIKCL-DNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREMSYSFGTIV 379
            .|||||:||.:||: :|.|:...::||::|:|||:||||.|.::.|||:||||...:..:|..::
Zfish   349 SSSSATLPLMMKCVEENNGVSKHISRFILPIGATVNMDGAACFQCVAAVFIAQLNGIPLNFVQVI 413

  Fly   380 AVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINVMCDALGTI 444
            .:.:||||:|:||||||..|::|:.::|::|||...|:|||:|||||:||..|.|||..||.|..
Zfish   414 TILVTATASSVGAAGIPAGGVLTLAIILESVGLPTNDLSLILAVDWLVDRTCTVINVEGDAYGAG 478

  Fly   445 LVNHL-----SKNDLASVDRLNAE 463
            |:.:|     :||:...:|::..|
Zfish   479 LLQYLVDRHPNKNEEEELDKIRVE 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 170/440 (39%)
slc1a5NP_001177684.1 SDF 53..480 CDD:278787 169/437 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 397 1.000 Domainoid score I716
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 415 1.000 Inparanoid score I1797
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100309
Panther 1 1.100 - - O PTHR11958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.980

Return to query results.
Submit another query.