DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment borr and Cdca8

DIOPT Version :9

Sequence 1:NP_723450.1 Gene:borr / 34245 FlyBaseID:FBgn0032105 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001020221.1 Gene:Cdca8 / 500545 RGDID:1566306 Length:288 Species:Rattus norvegicus


Alignment Length:327 Identity:77/327 - (23%)
Similarity:122/327 - (37%) Gaps:86/327 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NSKRNREVA------NREEKVRLYELKMDSRLISIDSLETKFLSAVDHQVKTLLGQVQK--ELAN 65
            |:.|:|::|      :||.:||..:::.|.                    :|||.:|:.  .:..
  Rat    14 NTLRSRKLASFLKDFDREVQVRTKQIESDR--------------------QTLLKEVENLYNIEV 58

  Fly    66 LKMPEVLRLFEELDRFS--------DFKASDQTQLLASMSMSGSAIEGHAPSATGSR---NDEGY 119
            |::|:.|::.:.||.|:        :..|:....:....:::..||:....|....:   .||..
  Rat    59 LRLPKALQVMKWLDYFALGGNRQALEEAATADRDITEINNLTAEAIQTPLKSVKKRKVIEVDEAI 123

  Fly   120 LTEDSSIGASGGSILAAHTGSLLRSTKAMRTPGPLHSARARRARRSRSACGDLNILHSAKPPSIS 184
            ..|:......||.      |...:|.|.:|      |||.:|.                 |||..
  Rat   124 KEEEEDEEEEGGG------GGGRKSHKNLR------SARVKRC-----------------PPSKK 159

  Fly   185 SSSSSSRNSRSK-----LRTPMASRAKAFSADRTPLKQKQMRSGSPTTPPMAFLRYPKPGEVA-- 242
            .:.|....||||     ..||..||.:......||....:..|....||.   ||.|...|..  
  Rat   160 RTQSIQGRSRSKRLSHDFVTPAMSRLEPSLVKPTPGMTPRFDSRVFKTPG---LRTPAAKEQVYN 221

  Fly   243 LSKYGSPMVAQVMPDKFANVNIPIRNGVLSLRPKKLDADEVESNLLENLDEDTLNQIKTLHENLQ 307
            :|..|||:.    ..|..::::||..|. |||....|...|:   :..|:.:.|..||.|...|.
  Rat   222 ISINGSPLA----DSKEISLSVPIGGGA-SLRLLASDLQRVD---IAQLNPEALGNIKKLSSRLA 278

  Fly   308 MI 309
            .|
  Rat   279 QI 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
borrNP_723450.1 Borealin 196..312 CDD:287483 34/121 (28%)
Cdca8NP_001020221.1 Required for interaction with SENP3. /evidence=ECO:0000250 1..149 32/166 (19%)
Required for centromere localization. /evidence=ECO:0000250 1..88 19/93 (20%)
Required for interaction with INCENP. /evidence=ECO:0000250 1..58 13/63 (21%)
Required to form a minimal CPC core complex that localizes to the central spindle and midbody and properly executes the role of the CPC during cytokinesis. /evidence=ECO:0000250 10..109 22/114 (19%)
Required for interaction with INCENP and BIRC5. /evidence=ECO:0000250 20..78 16/77 (21%)
Nbl1_Borealin_N 22..76 CDD:287425 16/73 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..173 19/77 (25%)
Borealin 168..283 CDD:287483 37/124 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16040
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.