Sequence 1: | NP_001245949.1 | Gene: | tai / 34242 | FlyBaseID: | FBgn0041092 | Length: | 2047 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_114010.1 | Gene: | Ncoa2 / 83724 | RGDID: | 620108 | Length: | 1465 | Species: | Rattus norvegicus |
Alignment Length: | 1869 | Identity: | 385/1869 - (20%) |
---|---|---|---|
Similarity: | 580/1869 - (31%) | Gaps: | 675/1869 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 209 ISANSANSATSGR-KIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEILTLNKRG-DMT 271
Fly 272 STKPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTRC 336
Fly 337 SRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYFEALEHYISGVGWVLLQVNANGII 401
Fly 402 ESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAK----LEPIINTMYNNPNGGNSNSANNSGPGG 462
Fly 463 SSAGTSAGVWGDLEELNNGNASQGSNSSGAGGLGGAGGAAAGKKRSISTKVRMLVKDTRTATQTS 527
Fly 528 SNCEEKPLRQSGHQDKYEEVVLIAA----PVKDDA-DASSSVLCLITR-PEDESPLEINIQQHVQ 586
Fly 587 QQPIEQMTFKLDIHGKILTLDPTALREPFKQHLQTWVGRLWQDLCHPHD---LSTLKSHLRDIQD 648
Fly 649 SASANSPGAGAGTSVVSRPFRLRLGAPDVYVHVKANSRLFLNQTPGEGDFIMSVQTLLNSEN--D 711
Fly 712 MNSSNTGAGSGGLGLGQLCAMAPSPSLASSLLSSLSMDGLHGGTGSGSSSSPAASGMLPTHLLGG 776
Fly 777 LVGGGQQGGGGNSTQTTSVGGPLMSSAIINGTGLQQQQQQQQRSGASSSASSSANALVNAFTASP 841
Fly 842 APAEHSFYGSDTFEFDIAAHSSSFE-LDPSGGVGAWTDSRPNSRASVATPVSTPRPPSG-----H 900
Fly 901 GFSPAVCASPATPYQLSSHSAASLPSPQSNASAGGGNYGGFNFHSFDSSDV-------------- 951
Fly 952 -----KPEKDVQQQQNQQQSNN-------NSSSSNPLLG--GGLPNGVGGMLLSQQQQQQQTPPQ 1002
Fly 1003 -----QQQQQQQQESSERLRH----------LLTKSQSMAGGLGGLGDDEKYFKPEG-SEEEKHA 1051
Fly 1052 SGGFKMGGQPGGMGMFGPMGSMGRGVGNS-SMLHK-AGNSQNPMLLKLLNEKSEDDDGN--GSGG 1112
Fly 1113 GPGS---------MNNSRQSELMRQLKNPDGGSHGMHRNSASGNMSTEDL--------KAMLKIQ 1160
Fly 1161 SDPSLNRK----RSLN-----EPDDDPSAKRS-------------------EDKP-------SKL 1190
Fly 1191 CTQNKMLAKLLQNPPKIP----KA---------------------PNPEQPLQVKTL-------- 1222
Fly 1223 -PDITSSTVSSTLAAPGNLISAG-----------STG-----------------PKAAANR---- 1254
Fly 1255 ------NRKQQ--------------QQQQQQQQQQQQQQVAGI-PSQQQQQQPNDVYLSQQQQQQ 1298
Fly 1299 LQSP---------QLAFQHQQLATTATTSITTAASTSAAAAAAAAILGEGDSELSKLLDSVMEYY 1354
Fly 1355 P----------DDTPIVTNAPSEASAINDIQ-----KSLMLDVESAAFGNDLNQQLMMTQQQQHQ 1404
Fly 1405 QQQQQQQLLALQLAQQQQQQRQQHLQQPPA---------YPGMLNMQQQQHQQQQQQNQQHIMQR 1460
Fly 1461 LEAMRNQGNQGFQRPPPMYPARGRGPMNAVATPGGVVLPAQQQLRNIRQQQQLAAAQQKE----R 1521
Fly 1522 LLQQQQKQQLLVPENASEYWGNSNLQLIIKLIVSYILAGMNAGLNNIGSLLNTTGAPNVSLSRTN 1586
Fly 1587 LP-SDAQ---LSPNFAQTLMQQQLSPGRSAPYSPQPNQGY----APQFPQPGQRLSPQQQQQLSQ 1643
Fly 1644 QQQNNVQQQQLAYQQQQVGDGGRSNTPFGSNSGMQSPGMQNSPQQWGSGGGGGGGPGGPLPSGNA 1708
Fly 1709 GRTLQQHNPMLIAQLQGVSPYNARQYQQNQRRGLNSPGAVGPGGNPAAQAALQRQNSFQGQ-GGG 1772
Fly 1773 GATTPDGSGVGFGGPQSPYGTNVNVFQQQQLQRLQRQGSVPQATQHLPG 1821 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tai | NP_001245949.1 | HLH | 235..286 | CDD:238036 | 23/51 (45%) |
PAS | 377..442 | CDD:214512 | 17/68 (25%) | ||
PAS_11 | 591..711 | CDD:291273 | 31/124 (25%) | ||
Ncoa2 | NP_114010.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..40 | 10/40 (25%) | |
HLH | 35..88 | CDD:197674 | 26/54 (48%) | ||
PAS | 119..215 | CDD:279347 | 31/160 (19%) | ||
PAS | 123..213 | CDD:238075 | 27/154 (18%) | ||
PAS_11 | 268..378 | CDD:291273 | 30/121 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 449..528 | 27/89 (30%) | |||
NCOA_u2 | 463..587 | CDD:293270 | 32/134 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 547..741 | 41/214 (19%) | |||
SRC-1 | 640..709 | CDD:285981 | 19/89 (21%) | ||
LXXLL motif 1 | 641..645 | 0/3 (0%) | |||
LXXLL motif 2 | 690..694 | 2/3 (67%) | |||
CASP8AP2-binding | 691..743 | 11/51 (22%) | |||
Interaction with ARNTL. /evidence=ECO:0000250|UniProtKB:Q61026 | 730..1121 | 72/417 (17%) | |||
DUF4927 | 731..816 | CDD:292896 | 15/99 (15%) | ||
LXXLL motif 3 | 745..749 | 1/3 (33%) | |||
LXXLL motif 4 | 878..882 | 0/3 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1052..1075 | 3/31 (10%) | |||
Nuc_rec_co-act | 1071..1116 | CDD:285967 | 9/46 (20%) | ||
LLXXLXXXL motif | 1079..1087 | 4/9 (44%) | |||
DUF1518 | 1281..1338 | CDD:284808 | 17/72 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1311..1330 | 5/18 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166341479 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 108 | 1.000 | Inparanoid score | I4820 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10684 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.980 |