Sequence 1: | NP_001245949.1 | Gene: | tai / 34242 | FlyBaseID: | FBgn0041092 | Length: | 2047 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571852.1 | Gene: | ncoa2 / 81884 | ZFINID: | ZDB-GENE-010406-3 | Length: | 1505 | Species: | Danio rerio |
Alignment Length: | 1957 | Identity: | 418/1957 - (21%) |
---|---|---|---|
Similarity: | 627/1957 - (32%) | Gaps: | 723/1957 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 207 SPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEILTLNKRG-DM 270
Fly 271 TSTKPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTR 335
Fly 336 CSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYFEALEHYISGVGWVLLQVNANGI 400
Fly 401 IESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKLEPIINTMYNNPNGGNSNSANNSGPGGSSA 465
Fly 466 GTSAGVWGDLEELNNGNASQGSNSSGAGGLGGAGGAAAGKKRSISTKVRMLVKDTRTATQTSSNC 530
Fly 531 EEKPLRQSGHQDKYEEVVLIAA----PVKDDA-DASSSVLCLITR-PEDESPLEINIQQHVQQQP 589
Fly 590 IEQMTFKLDIHGKILTLDPTALREPFKQHLQTWVGRLWQ--DLCHPHDLSTLKSHLRDIQDSASA 652
Fly 653 NSPGAGAGTSVVSRPFRLRLGAPDVYVHVKANSRLFLNQTPGEGDFIMSVQTLLNSENDMNSSNT 717
Fly 718 GAGSGGLGLGQLCAMAPSPSLASSLLSSLSMDGLHGGTGSGSSSSPAASGMLPTHLLGGLVGGGQ 782
Fly 783 QGGGGN-STQTTSVGGPLMSSAIINGTGLQQQQQQQQRSGASSSASSSANALVNAFTASPAPAEH 846
Fly 847 SFYGSDTFEFDIAAHSSSFELDPSGGVGAWTDSRPNSRASVATPVSTPRPPSGHGFSPAVCASPA 911
Fly 912 TPYQLSSHSAASLPSPQSN-ASAGGGNYGGFNFHSFDSSDVKPEKDVQQQQNQQQSNNNSSSSNP 975
Fly 976 LLGGGLPNGVGGMLLSQQQQQQQTPPQQQQQQQQQESSERLRHLLTKSQSMAGGLGGLGDDEKYF 1040
Fly 1041 KPEGSEEEKHASGGFKMGGQPGGMGMFGPMGSMGRGVGNSSMLHKAGNSQNPMLLKLLNEKSEDD 1105
Fly 1106 DGNG----SGGGPGSMNNSRQSELMRQLKNPDGGSHGMHRNSASGNMST------EDLKAMLKIQ 1160
Fly 1161 SDP----SLNRKRSLNEPDDDPSA----------KRSEDKPSKLCTQNKMLAKLLQNPPKIPKAP 1211
Fly 1212 NPE-QPLQVK-------------------------TLPDITSSTVSS-----TLAAPGNLISA-- 1243
Fly 1244 ---------GSTGPKAAANRNRKQQQQQQQQQQQQQQQQVAGIPSQ------------------- 1280
Fly 1281 -QQQQQP----NDVYLSQQQQQQL--------------------QSPQLAFQHQQLATTATTSIT 1320
Fly 1321 TAASTSAAAAAAAAILGEG---------------------------------------------- 1339
Fly 1340 ---------DSELSKLLDSVMEYYP---------------DDT--PIVTNAPSEASA-------- 1370
Fly 1371 ------INDIQKSLML--------DVESAAF-GNDLNQQLMMTQQ-QQHQQQQQQQQLLALQLAQ 1419
Fly 1420 QQQQQ------RQQHLQQPPAYPGMLNMQ--------------------QQQHQQQQQQNQQHIM 1458
Fly 1459 QRLEAMRNQGNQGFQRPPPMYP-ARGRGPMNAVATPGGVVLPAQQQ---LRNIRQQQQLAAAQQK 1519
Fly 1520 ERLLQQQQK-------QQLLVPENASEYWGNSNLQLIIKLIVSYILAGMNAGLNNIGSLLNTTGA 1577
Fly 1578 PNVSLSRTNLPSDAQLSPNFAQTLMQQQLSPGRSAPYSPQPNQGYAPQFPQPGQRLSPQQQQQLS 1642
Fly 1643 QQQQNNVQQQQLAYQQQQVGDGGRSNTPFGSNSGMQSPGMQNSPQQWGSGG------GGGGG--- 1698
Fly 1699 PGGPLPSGNAGRTLQQHNPMLIAQLQGVSPYNARQYQQNQRRGLNSPGAVGPGGNPAAQAALQRQ 1763
Fly 1764 NSFQGQGGGGATTPDGSGVGFGGPQSPYGTNVNVFQQQQLQRLQRQGSVPQATQHLPGSPRFGSS 1828
Fly 1829 PGSSNNTDSSAAAGNQQQQQQQQQQQQQQHQQQQHQQLMNGLSMSPHPHPHPAMMGVGGMGSGGG 1893
Fly 1894 NGIIGLG 1900 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tai | NP_001245949.1 | HLH | 235..286 | CDD:238036 | 21/51 (41%) |
PAS | 377..442 | CDD:214512 | 19/64 (30%) | ||
PAS_11 | 591..711 | CDD:291273 | 35/121 (29%) | ||
ncoa2 | NP_571852.1 | basic helix-loop-helix DNA-binding domain | 18..86 | 27/72 (38%) | |
HLH | 36..89 | CDD:197674 | 25/54 (46%) | ||
PAS | 119..176 | CDD:214512 | 19/70 (27%) | ||
PAS A domain | 125..184 | 17/67 (25%) | |||
PAS_11 | 267..375 | CDD:291273 | 35/119 (29%) | ||
PAS B domain | 269..330 | 18/60 (30%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 392..515 | 40/191 (21%) | |||
NCOA_u2 | 460..567 | CDD:293270 | 33/150 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 542..562 | 4/23 (17%) | |||
SRC-1 | 629..705 | CDD:285981 | 21/88 (24%) | ||
NR Box | 630..634 | 2/3 (67%) | |||
NR Box | 686..690 | 1/3 (33%) | |||
DUF4927 | 728..803 | CDD:292896 | 13/76 (17%) | ||
NR Box | 742..746 | 1/3 (33%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 835..871 | 11/38 (29%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 939..962 | 7/24 (29%) | |||
Nuc_rec_co-act | 1061..1106 | CDD:285967 | 6/44 (14%) | ||
LLXXLXXXL motif. /evidence=ECO:0000255 | 1069..1077 | 0/7 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1246..1265 | 8/20 (40%) | |||
HAT-like domain | 1310..1378 | 25/92 (27%) | |||
DUF1518 | 1354..1410 | CDD:284808 | 20/61 (33%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1475..1505 | 9/56 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170581483 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 154 | 1.000 | Inparanoid score | I4291 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10684 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.980 |