DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tai and ncoa3

DIOPT Version :9

Sequence 1:NP_001245949.1 Gene:tai / 34242 FlyBaseID:FBgn0041092 Length:2047 Species:Drosophila melanogaster
Sequence 2:XP_031750620.1 Gene:ncoa3 / 733554 XenbaseID:XB-GENE-486618 Length:1395 Species:Xenopus tropicalis


Alignment Length:1704 Identity:356/1704 - (20%)
Similarity:546/1704 - (32%) Gaps:535/1704 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 SPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEILTLNKRG-DM 270
            |.:..||.:...:  :.|::..|..:.|...:. |:.||||||.|:.|||:|:|:::.|... |.
 Frog     2 SGLGENSLDPLAA--ETRKRKPSSCDTPGPGLT-CSGEKRRREQESKYIEELAELISANLSDIDN 63

  Fly   271 TSTKPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTR 335
            .:.||||.|||.:.||..|:|.::|:                      .|:|:::..|...:|| 
 Frog    64 FNVKPDKCAILKETVRQIRQIKEQGK----------------------ASSNDDDVQKADVSST- 105

  Fly   336 CSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYFEALEHYISGVGWVLLQVNANGI 400
             .:...|..|:.|                 |||          :||:.:       |..||..|.
 Frog   106 -GQGVIDKDSLGP-----------------LLL----------QALDGF-------LFVVNREGS 135

  Fly   401 IESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKLEPIINTMYNNPNGGNSNSANNSGPGGSSA 465
            |...::|:...:.|::::|.:..:|..|:..|..      :.:.|.|     .|..|..|..|. 
 Frog   136 IVFVSENVTQYLQYKQEDLVNTSVYSILHEEDRK------DFLKNLP-----KSTVNGVPWSSE- 188

  Fly   466 GTSAGVWGDLEELNNGNASQGSNSSGAGGLGGAGGAAAGKKRSISTKVRMLVKDTRTATQTSSNC 530
                                                 ..:::|.:...|||||.:....:..   
 Frog   189 -------------------------------------TPRQKSHTFNCRMLVKTSHDHLEDG--- 213

  Fly   531 EEKPLRQSGHQD---KYEEVVLIA-----APVKDDADASSSVLCLITRPEDESPLEINIQQHVQQ 587
                   ||:.|   :||.:...|     |.:::..|..|.::|:..|        |...:.|..
 Frog   214 -------SGNLDTRQRYETMQCFALSQPRAMIEEGEDLQSCMICVARR--------ITTVERVFS 263

  Fly   588 QPIEQMTFKLDIHGKILTLDPTALREPFKQHLQTWVGRLWQD-LCHPHDLS-TLKSHLRDIQDSA 650
            ...|....:.|:.||::.:|..:||...:...:..:.|..|. |||..... |.|.|.::.....
 Frog   264 ANPESFITRHDLTGKVVNIDANSLRSSMRPGFEDTIRRCIQRFLCHSDGQPWTYKRHYQEAYVHG 328

  Fly   651 SANSP----GAGAGTSVV----SRPFRLRL-GAPDVYVHVKANSRLFLNQTPGEGDFIMSVQTLL 706
            .:.:|    ....||.|.    |:.||:.: ..|..:|......|......|.......:::..:
 Frog   329 HSETPLYRFSLADGTIVTAQTKSKLFRIPVTNDPHGFVSTHFLQREQNGYRPNPNPMAQNIRPPV 393

  Fly   707 NSE--NDMNS--------SNTGAGSG---------GLGLGQLCAMAP---SPSLASSLLSSLSMD 749
            |..  |.||:        .|...|.|         |:.......|||   .|.:..|...:.|..
 Frog   394 NPNPPNTMNAMPPQAMQQQNRNYGMGDPNSMAQMPGMRYKSPGNMAPVNQPPGVQQSPYQNNSNY 458

  Fly   750 GL------HGGTGSGSS-----------SSP--AASGMLPTHLLGGLVG-GGQQGGGGNSTQTTS 794
            ||      ||..|..|:           :||  |::...|...:...:| .|..|||..|:.:.|
 Frog   459 GLNMNSPPHGSPGMNSNQPNLMVSPRNRASPKMASNQFSPVPGMNSPMGSSGSAGGGSFSSSSLS 523

  Fly   795 --------VGGPLMSS------AIINGTGLQQQQQQQ------------------------QRSG 821
                    ||..|:||      .:.|.|.:...||.:                        |.||
 Frog   524 ALHAISEGVGSSLLSSLSSPGQKVENNTNMNMPQQGKIGNQDCKSPSGLYCEQGQVESSVCQSSG 588

  Fly   822 ---------------ASSSASSSANA-----LVNAFTASPAPAEHSFYGSDTFEFDIAAHSSSFE 866
                           ||.|..|.|.:     |:...|.|......|...|.:.:   ...||:..
 Frog   589 REHLGEKDVKENILEASDSQRSQAESKGHKKLLQLLTGSSEDRGPSLMSSSSID---CKDSSTNV 650

  Fly   867 LDPSG-------GVGAWTD-----------------SRPNSRASVATPVSTPRPPSGHGFSPAVC 907
            ..|||       ||.:.::                 ...||.|.||.  .|........|...|.
 Frog   651 TSPSGVSSSTSTGVSSTSNLHGSMLQEKHRILHKLLQNGNSPAEVAK--ITAEATGKDSFQETVS 713

  Fly   908 ASPATPYQLSSHSAASLPSPQSNASAGGGNYGGFNFHSFDSSDVKP--EKDVQQQQNQQQSNNN- 969
            ::|.|...:.....:  |..:.|        .....|..|..|.|.  .||::.:.....:... 
 Frog   714 SAPCTEATVKREQLS--PKKKEN--------NALLRHLLDKDDWKDPLSKDIKPKVEHMDAKMGP 768

  Fly   970 -SSSSNPLLGGGLPNGVGGMLLSQQQQQQQTPPQQQQQQQQQESSERLRHLLTKSQSMAGGLGGL 1033
             ||||.|                       |..|.::.:.:.|.::.:...|....::.|.|.| 
 Frog   769 CSSSSVP-----------------------TSSQDKEVKIKTEPADEVPGDLDNLDAILGDLAG- 809

  Fly  1034 GDDEKYFKPEGSEEEKHASGGFKMGGQP-----GGMGMFGPMGSMG------------------- 1074
              .:.|.....|....|   |.|   ||     ..:||..|....|                   
 Frog   810 --SDFYNNSMSSRASDH---GPK---QPVFQDSPTLGMRSPDSVHGSRPPFNRAISLDSTMPGNS 866

  Fly  1075 ----RGVGNSSMLHKAGNSQNPMLLKLLNEKSEDDDGNGSGGGPG-SMNN------SRQSELMRQ 1128
                |.|.:..||.|.|...:|.::     ..:|:.|...|.||. |||.      :.|:..:.:
 Frog   867 TPPVRNVNSFPMLPKQGMMGSPRMM-----DGQDNFGVMMGSGPNRSMNQHPGGEWAMQNAAVNR 926

  Fly  1129 LKNPDGGSHG---------MHRNSASGNMSTEDLKAMLKIQSDPSLNRKRSLNEPDDDPSAKRSE 1184
            |:.|:.|:.|         |.|.:..|||              |.| ..||.:.|...| ..:.:
 Frog   927 LEPPNAGNVGRPGPDYSTAMPRPAMGGNM--------------PGL-PARSNSIPGSRP-VLQQQ 975

  Fly  1185 DKPSKLCTQNKMLAKLLQNPPKIPKAPNPEQPLQVKTLPDITSSTVSSTLAAPGNLISAGSTGPK 1249
            ..|.:   .|:|...:..||.......||.     .:.||             |.:|..|..|.:
 Frog   976 MLPMR---PNEMAMGMGSNPYGQQAPSNPP-----GSWPD-------------GMMIDQGHGGTQ 1019

  Fly  1250 AAANRNRKQQQQQQQQQQQQQQQQVAGIPSQQQQQQPNDVYLSQQQQQQLQSPQLAFQHQQLATT 1314
            |                             :|..:...|..|......:.|:.::|.. .||.|.
 Frog  1020 A-----------------------------RQLGRNSLDDLLCPPSTVEGQTDEIALL-DQLHTL 1054

  Fly  1315 ATTSITTAASTSAAAAAAAAILGEGDSELSKLLDSVMEYYPDDTPIVTNAPSEASAINDIQKSLM 1379
            .:.:..|.......|.....::.:|.: |....||   |.|..:|::.:           ||..|
 Frog  1055 LSNTDATGLEEIDRALGIPDLVSQGQA-LEPQQDS---YQPQGSPVMID-----------QKPPM 1104

  Fly  1380 LDVESAAFGNDLNQQLMMTQQQQHQ-------QQQQQQQLLALQLAQQQQQQRQQHLQQP-PAYP 1436
            .....|..|..:........|.||.       |..|||....|     |....:.:|.:| ...|
 Frog  1105 YGQPYAGQGTAMAAAGFNAMQGQHPPFNSVMGQMNQQQGNFPL-----QGMHPRANLMRPRNNIP 1164

  Fly  1437 GMLNMQQQQHQQQQQ---QNQQHIMQRLEAMRNQGNQGFQRPPPMYPARGRGPMNAVATPGGVVL 1498
            ..|.||.||..|.||   ||:|.:..::|.| |.|..|..||....|...:|.:||     .:|.
 Frog  1165 KQLRMQLQQRLQGQQFLNQNRQALEMKVETM-NPGGAGVMRPVMQTPVSQQGFLNA-----QMVA 1223

  Fly  1499 PAQQQL--RNIRQQQQLAAAQQKERLLQQQQKQQLLVPENASEYWGNSNLQLIIKLIVSYILAGM 1561
            ...::|  ..|||.:.....||:    ||.|.|....|.|.:.                      
 Frog  1224 QRNRELISHQIRQHRMAMMMQQQ----QQGQPQTFSPPPNVTA---------------------- 1262

  Fly  1562 NAGLNNIGSLLNTTGAPNVSLSRTNLPSDAQLSPNFAQTLMQQQLSP--------------GRSA 1612
                  ..|:.|..|.|.:..:.   |......||:.   |.||..|              .|.|
 Frog  1263 ------TASMDNPLGGPPMPQAP---PQQFSYPPNYG---MNQQADPTFGRVSSPPNAIMSSRMA 1315

  Fly  1613 PYSPQPNQGYAPQFPQPGQRLSP---QQQQQLSQQQQNNVQQQQLAYQQQQVGDGGRSNTPFGSN 1674
            | |..|:...|..:|.|..:..|   ..:.....|||.:.|.....|....:...|........|
 Frog  1316 P-SQNPHPQTAQMYPSPDMKGWPSGNMTRPNSFPQQQYSHQANPATYNMMHMNGNGSHMGQINMN 1379

  Fly  1675 SGMQSPGMQNSPQQ 1688
            | |...||...|.|
 Frog  1380 S-MPMSGMPMGPDQ 1392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
taiNP_001245949.1 HLH 235..286 CDD:238036 22/51 (43%)
PAS 377..442 CDD:214512 13/64 (20%)
PAS_11 591..711 CDD:291273 27/132 (20%)
ncoa3XP_031750620.1 bHLH-PAS_NCoA3_SRC3 31..103 CDD:381519 30/94 (32%)
PAS 118..175 CDD:214512 16/79 (20%)
PAS_11 267..377 CDD:405306 25/109 (23%)
NCOA_u2 458..571 CDD:406952 26/112 (23%)
SRC-1 615..701 CDD:400955 18/90 (20%)
DUF4927 723..810 CDD:406644 20/122 (16%)
Nuc_rec_co-act 1039..1085 CDD:400942 9/47 (19%)
DUF1518 1265..1321 CDD:400033 15/62 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 130 1.000 Inparanoid score I4510
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10684
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.150

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