DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tai and npas2

DIOPT Version :10

Sequence 1:NP_001245949.1 Gene:tai / 34242 FlyBaseID:FBgn0041092 Length:2047 Species:Drosophila melanogaster
Sequence 2:NP_840084.1 Gene:npas2 / 352934 ZFINID:ZDB-GENE-030408-3 Length:845 Species:Danio rerio


Alignment Length:634 Identity:122/634 - (19%)
Similarity:181/634 - (28%) Gaps:225/634 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1294 QQQQQLQSPQLAFQHQQLA----TTATTSITTAASTSAAAAAAAAILGEGDSELSKLLDSVMEYY 1354
            ||...||:......||..:    ...|.|:.:.|...|....... |.|..|:::.......|.:
Zfish   357 QQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVRAERRREFG-LEESSSDMATSSIKGQEVF 420

  Fly  1355 PDDTPIVTNAPSEA------SAINDIQKSLMLDVESAAFGNDLNQQLMMTQQQQHQQQQQQQQLL 1413
            .|..|     |.||      ||.:...:|......:|...:..|..:..|:.....:|       
Zfish   421 LDMCP-----PLEATRDRINSARSVSSQSSRKSSHTALSDSASNSSVRYTEACTSSRQ------- 473

  Fly  1414 ALQLAQQQQQQRQQHL-------QQPPAYPGMLNMQQQQHQQQQ------QQNQQHIMQRLEAMR 1465
            :..:..::...|..|.       :|..:.|..|:....||....      ||.|..:|.:|:...
Zfish   474 SASIGPEKSSNRMTHTGTKTLIQRQSSSEPPSLSPSCSQHSAMTQSLYSFQQPQLGVMHQLKEQL 538

  Fly  1466 NQGNQGFQRPPPMYPARGRGPMNAVATPGGVVLPAQQQLRNIRQQQQLAAAQQKERLLQQQQKQQ 1530
            .:..:..|..                     :...||:|.:|:::.|||                
Zfish   539 EERTRILQAD---------------------IKTQQQELHDIKEKLQLA---------------- 566

  Fly  1531 LLVPENASEYWGNSNLQLIIKLIVSYILAGMNAGLNNIG--SLLNTTGAPNVSLSRTNLPSDAQL 1593
                          |||::::..:....||........|  :..||...|...:|.    |...|
Zfish   567 --------------NLQMLLQQPIQGEFAGSGPQQQGPGRPAQQNTHPKPQHCVSH----SSHTL 613

  Fly  1594 SPNFAQTLMQQQL--------------------SPGRSAPYSPQPNQGYAPQ------------F 1626
            .||.:.|..||:|                    :|..|.|....||.|:..|            :
Zfish   614 QPNSSSTQGQQRLVQAGHMQAVSVPMQTHTSLTTPFYSNPMMFSPNHGHRSQHDTHCQRNTHADY 678

  Fly  1627 PQPGQ--RLSPQQQQQLSQQQQNNVQQQQLAYQQQQVGDGGRSNTPFGSNSGMQSPGMQNSPQQW 1689
            .|.||  .|..|..|.|.|......|..|.....||        |.:.....|.:|..       
Zfish   679 SQDGQLRMLLNQPMQTLVQDSNGGPQSSQCTSTIQQ--------TKYPLEQQMMAPSF------- 728

  Fly  1690 GSGGGGGGGPGGPLPSGNAGRTLQQH----NPMLIAQLQGVSPYNARQYQQNQRRGLNSPGAVGP 1750
                        |:...|....|...    :|::|       |:|:....|........|     
Zfish   729 ------------PVQQVNCNAVLVPSPVFTSPIMI-------PHNSFITHQTTPTYTTHP----- 769

  Fly  1751 GGNPAAQAALQRQNSFQGQGGGGATTPDGSGVGFGGPQSPYGTNVNVFQQQQLQRLQRQGSV--- 1812
               |.|..:|..|                                   |.||..::|.||.:   
Zfish   770 ---PVAPHSLPLQ-----------------------------------QPQQFFQMQPQGLIHGT 796

  Fly  1813 -PQATQHLPGSPRFGSSPGSSNNTDSSAAAGNQQQQQQQQQQQQQQHQQ 1860
             .||..|.|..|:             .:..|..|.||||||||...|.|
Zfish   797 PTQALFHTPSVPQ-------------QSTVGYVQPQQQQQQQQHHHHSQ 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
taiNP_001245949.1 bHLH_SF 239..291 CDD:469605
PAS 377..442 CDD:214512
PAS_11 590..711 CDD:464214
npas2NP_840084.1 bHLH-PAS_PASD1 34..103 CDD:381579
PAS 119..>203 CDD:395786
PAS_11 286..388 CDD:464214 8/30 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.