Protein Alignment tai and clockb

DIOPT Version :9

• Sequence 1: NP_001245949.1
• Gene: tai / 34242
• FlyBaseID: FBgn0041092
• Length: 2047
• Species: Drosophila melanogaster
• Sequence 2: NP_840080.2
• Gene: clockb / 352927
• ZFINID: ZDB-GENE-030408-2
• Length: 820
• Species: Danio rerio
• Alignment Length: 1162
• Identity: 221/1162 - (19%)
• Similarity: 362/1162 - (31%)
• Gaps: 442/1162 - (38%)

  Fly   237 QINKCNNEKRRREAENGYIEQLSEILTLNKRGDMTSTKPDKAAILNQVVRTYREICDKGQNRDIS 301
            ::::..:||:||:..|..|::|..:|..|.|      |.||:.||.:.:...|:
Zfish    26 RVSRNKSEKKRRDQFNVLIKELGTMLPGNTR------KMDKSTILQKSIDYLRK----------- 73

  Fly   302 STSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPL---PE 363
                                |..|.::.:::..:                   ...:||.   .|
Zfish    74 --------------------NKENAAQSESSDIK-------------------QDWKPPFLSNEE 99

  Fly   364 PSLLLGQVPEISAYFEALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYL 428
            .|.|:         .|||:      |:.|:.: .:|.|...::::..|:.:...:|..|.|..:|
Zfish   100 FSQLM---------LEALD------GFFLVML-TDGYIIYISESVTSLLEHLPSDLMDQNLLNFL 148

  Fly   429 YSGDHAKLEPIINTMYNNPNGGNSNSANNSGPGGSSAGTSAGVWGDLEELNNGNASQGSNSSGAG 493
            ...||                |....|.:|.|             |:|.||:......:......
Zfish   149 PVVDH----------------GEVYKALSSQP-------------DIENLNSDYLKSKNQMEFCC 184

  Fly   494 GLGGAGGAAAGKKRSISTKVRML--VKDTRTATQTSSNCEEKPLRQSGHQDKYEEVVLIAAPVKD 556
            .:  ..|:...||..:...|:.:  .|......|.:.|..|..|:.|            ..|..|
Zfish   185 HM--LRGSVDPKKPPVYEYVKFIGNFKSLVNMPQKTRNGLEGILQHS------------LQPAFD 235

  Fly   557 DADASSSVLCLITRPEDESPLEINIQQHVQQQPIEQMTFKLDIHGKILTLD----PTALREPFKQ 617
            |.      ||.|.......|..|. :..:.::|.|:.|.:..:..|.|.||    |.....||:.
Zfish   236 DQ------LCFIATVRLAKPQFIK-EMCMVEEPNEEFTSRHSLEWKFLLLDHRAPPIIGYMPFEV 293

  Fly   618 HLQTWVGRLWQDLCHPHDLSTL-KSHLRDIQDSASANSPGAGAGTSVVSRPFRLRLGAPDVYVHV 681
                 :|....|..|..||.:| |.|...:|         .|.|.|...|    .|.....::.:
Zfish   294 -----LGTSGYDYYHVDDLHSLAKCHEHLMQ---------FGKGKSCYYR----FLTKGQQWIWL 340

  Fly   682 KANSRLFLNQTPGEGDFIMSVQTLLNSENDMNSSNTGAGSGGLGLGQLCAMAPSPSLASSLLSSL 746
            :.|..:..:|.....:||:...|:: |..::.:.....    :|:.:    :| |.|.:..:|
Zfish   341 QTNYYITYHQWNSRPEFIVCTHTVV-SYAEVRAERRRE----MGIEE----SP-PELTADKIS-- 393

  Fly   747 SMDGLHGGTGSGSSSSPAASGMLPTHLLGGLVGGGQQGGGGNSTQTTSVGGPLMSSAIINGTGLQ 811
                                                    |:.||            :.|.....
Zfish   394 ----------------------------------------GSETQ------------LNNSLKKV 406

  Fly   812 QQQQQQQRSGASSSASS--SANALVNAFTASPAPAEHSFYGSDTFEFDIAAHSSSFELDPSGGVG 874
            .::....||.::||.||  |::..::..|.:..|                   |...:|.|
Zfish   407 LERFSDSRSPSTSSRSSHKSSHTAISDNTCTSTP-------------------SKLHMDVS---- 448

  Fly   875 AWTDSRPNSRASVATPVSTPRPPSGHGFSPAVCASPATPYQLSSHSAASLPSPQSNASAGGGNYG 939
                             |:||              |||...:|..  .|..|.||.:|.
Zfish   449 -----------------SSPR--------------PATVDMISQR--RSSVSTQSMSSQ------ 474

  Fly   940 GFNFHSFDSSDVKPEKDVQQQQNQQQSNNNSSSSNP--LLGGGLPNGVGGMLLSQQQQQQQTPPQ 1002
              |....||    |.:..||.|:|||.........|  |....|    ..|...::|.:|:|...
Zfish   475 --NTTQTDS----PVQISQQTQHQQQQPQQPQQVQPNALFSAQL----NAMQHLKEQLEQRTRMI 529

  Fly  1003 QQQQQQQQESSERLRHLLTKSQSMAGGLGGLGDDEKYFKPEGSEEEKHASGGFKMGGQPGGMGMF 1067
            :...|:|||...::...|.:.|
Zfish   530 EANIQKQQEELRQIHEQLQRVQ------------------------------------------- 551

  Fly  1068 GP---MGSMGRGVGNSSMLHKAGNSQNPMLLKLLNEKSEDDDGNGSGGGPGSMNNSRQSELMRQL 1129
            ||   :....:|.|.|.:|.:.|.:||.:|              |.|        ::.|.:..|.
Zfish   552 GPQMILQQPAQGGGPSVLLPQVGGAQNNIL--------------GIG--------TQASVVAIQG 594

  Fly  1130 KNPDGGSHGMHRNSASGNMSTEDLKAMLKIQSDPSLNRKRSLNEPDDDPSAKRSEDKPSKLCTQN 1194
            :|....:|       ||:...:        |:.|.....|||.:.....|..:.....:.:....
Zfish   595 QNVTSTAH-------SGSAPQQ--------QTLPQQQTPRSLQQNLQSSSVTQCGPVYNTMMISQ 644

  Fly  1195 KMLAKLLQNP----PKIPKA------PNPEQPL-QVKTLPDITSSTVSSTLAAPGNLISAGS--- 1245
            ...|.::|.|    |||.:|      |..:|.: ::.|.|....:.:..|....|.:::|.|
Zfish   645 PANANVVQIPSNLAPKISQANAINRFPAGQQLVTKIVTAPMACGAVMVPTSMFMGQVVTAYSPFT 709

  Fly  1246 ------------TGPKAAANRNRK----QQQQQ---QQQQQQQQ--------------------- 1270
                        |.|...|::..:    |.|||   ||..:|||
Zfish   710 QQQGQTQTITLQTQPTVPADQQTQAATLQSQQQGATQQSTKQQQPFLQSTRLLHGNQPTQLILQA 774

  Fly  1271 ---QQQVAGIPSQQQQQQPNDVYLSQQQQQQLQSPQLAFQHQQLATTATTSITTAAS 1324
               |||....||||||||       ||.:...|.||     :|.|::..|...:|.|
Zfish   775 FPIQQQSTFTPSQQQQQQ-------QQLKPHTQKPQ-----KQTASSHQTDSASAQS 819

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tai	NP_001245949.1	HLH	235..286	CDD:238036	15/48 (31%)
		PAS	377..442	CDD:214512	14/64 (22%)
		PAS_11	591..711	CDD:291273	29/124 (23%)
clockb	NP_840080.2	HLH	22..76	CDD:238036	17/86 (20%)
		PAS	99..160	CDD:214512	18/92 (20%)
		PAS_11	263..366	CDD:291273	28/121 (23%)
		PAS	264..362	CDD:238075	26/115 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3561
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900