Sequence 1: | NP_001245949.1 | Gene: | tai / 34242 | FlyBaseID: | FBgn0041092 | Length: | 2047 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017449617.1 | Gene: | Ncoa1 / 313929 | RGDID: | 1309046 | Length: | 1443 | Species: | Rattus norvegicus |
Alignment Length: | 1814 | Identity: | 371/1814 - (20%) |
---|---|---|---|
Similarity: | 600/1814 - (33%) | Gaps: | 603/1814 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 NNEKRRREAENGYIEQLSEILTLNKRG-DMTSTKPDKAAILNQVVRTYREICDKGQNRDISSTST 305
Fly 306 NNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPE-----PS 365
Fly 366 LLLGQVPEISAYFEALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYS 430
Fly 431 GDHAKLEPIINTMYNNPNGGNSNSANNSGPGGSSAGTSAGVWGDLEELNNGNASQGSNSSGAGGL 495
Fly 496 GGAGGAAAGKKRSISTKVRMLV-KDTRTATQTSSNCEEKPLRQSGHQDKYE--EVVLIAAP--VK 555
Fly 556 DDADASSSVLCLITRPEDESPLEINIQQHVQQQPIEQMTFKLDIHGKILTLDPTALREPFKQHLQ 620
Fly 621 TWVGRL-WQDLCHP----------HDLSTLKSHLRDIQDSASANSPGAGAGTSVVSRPFRLRLGA 674
Fly 675 PDVYVHVKANSRLFLNQTPGEGDFIMSVQTL------LNSENDMNSS----------NTGAGSGG 723
Fly 724 LGLGQLCAMAPS-PSLASSLLSSLSMDGLHGGTG-SGSSSSPAASGMLPTHLLGGLVGGGQQGGG 786
Fly 787 GNSTQTTSVGGPLMSSAIINGTGLQQQQQQQQRSGASSSASSSANALVNAFTASPAPAEHSFYGS 851
Fly 852 DTFEFDIAAHSSSFELDPSGGVGAWTDSRPNSRASVATPVSTPR-----PPSGHGFSPAVCASPA 911
Fly 912 TPYQLSSHSAASLPSPQSNASAGGGNYGGFNFHSFDSSDVKPEKDVQQQQNQQ-QSNNNSSSSNP 975
Fly 976 LLGGGLPN----GVGGMLLSQQQQQ--QQTPPQQQQQQQQQESSERLRHLL----TKSQSMAGGL 1030
Fly 1031 GGLGDDEKYFKPEGSEEEKHASGGFKMGGQPGGMGMFGPMGSMGRGVGNSSMLHKAGNSQNPMLL 1095
Fly 1096 KLLNEKSEDDDG---------NGSGGGPGSM---------NNSRQSELMRQLKNPDGGSHGMHRN 1142
Fly 1143 SASGNMSTEDLKAML--KIQSDPSLNRKRSLNEPDDD---------------------PSAKRSE 1184
Fly 1185 DKPSKLCTQNKM---------LAKLLQNPPKIPKAPNPEQPLQVKTLPDITSSTVSSTLAAPGNL 1240
Fly 1241 ISAGSTGPKAAANRNRKQQQQQQQQQQQQQQQQVAGIPSQQQQQQPNDVYLSQQQQQQLQSPQLA 1305
Fly 1306 FQHQQLATTATTSITTAASTSAAAAAAAAIL-GEGDSELSKL--------------LDSVMEYYP 1355
Fly 1356 ----------DDTPIV----TNAPSEASAINDIQKSLMLDVESAAFGNDLNQQLMMTQQQQHQQQ 1406
Fly 1407 QQQQQLLALQLAQQQQQQRQQHLQQPPAYPGMLNMQQQQHQQQQQ----QNQQHIMQRLEAMRNQ 1467
Fly 1468 G---NQGFQR---PPPMYPARGRGPMNAVATPGGVVLPAQQQLRNIRQQQQLAAAQQKERLLQQQ 1526
Fly 1527 QKQQLLVPENASEYWGNSNLQLIIKLIVSYILAGMNAGLNNIGSLLNTTGAPNVSLSRTNLPSDA 1591
Fly 1592 ----QLSPNF--------AQTLMQQQL--SPGRS-APYSPQPNQGYAPQF-PQPGQRLSPQQQQQ 1640
Fly 1641 LSQQQQNNVQQQQLAYQQQQVGDGGR-------------SNTPFGSNSGMQSPGMQNSPQQWGSG 1692
Fly 1693 GGGGG-----------GPGGP-----------LPSGNAGRTLQQHNPMLIAQLQGVSPYNARQYQ 1735
Fly 1736 QNQRRGLNSPGAVGPGGNPAAQAALQRQNSFQGQGGGG---ATTPDGSGVGFGGPQSPYGTNVNV 1797
Fly 1798 FQQQQLQRLQRQGSVPQATQHLPGSPRFGSSPGSSNNTDSSAAAGNQQQQQQQQQQQQQ 1856 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tai | NP_001245949.1 | HLH | 235..286 | CDD:238036 | 22/44 (50%) |
PAS | 377..442 | CDD:214512 | 19/64 (30%) | ||
PAS_11 | 591..711 | CDD:291273 | 29/136 (21%) | ||
Ncoa1 | XP_017449617.1 | bHLH-PAS_NCoA1_SRC1 | 27..87 | CDD:381518 | 24/69 (35%) |
PAS | 120..213 | CDD:238075 | 28/147 (19%) | ||
PAS_11 | 260..370 | CDD:405306 | 29/139 (21%) | ||
NCOA_u2 | 469..591 | CDD:406952 | 32/169 (19%) | ||
SRC-1 | 633..709 | CDD:400955 | 15/110 (14%) | ||
DUF4927 | 744..821 | CDD:406644 | 14/81 (17%) | ||
Nuc_rec_co-act | 927..972 | CDD:400942 | 8/44 (18%) | ||
Med15 | 995..>1362 | CDD:312941 | 102/460 (22%) | ||
DUF1518 | 1152..1208 | CDD:400033 | 16/56 (29%) | ||
DUF1518 | 1215..1270 | CDD:400033 | 11/54 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166341480 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 108 | 1.000 | Inparanoid score | I4820 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR10684 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.080 |